# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_32	LOCUS_00310	sequence001:39904..40545(-)	frameshift		39975	WP_002287470.1	LysR family transcriptional regulator	89.2	65.2	45.8
MGA_54	LOCUS_00530	sequence001:67302..67964(+)	partial			WP_011837306.1	DNA adenine methylase	70.5	54.2	52.9
MGA_56	LOCUS_00550	sequence001:68899..69915(-)	internal_stop_codon	70108..70110(-)		WP_011101454.1	replication-associated recombination protein A	98.2	79.0	75.0
MGA_161	LOCUS_01580	sequence004:17699..17932(-)	partial			WP_011254157.1	preprotein translocase subunit SecG	74.0	74.0	87.7
MGA_175	LOCUS_01720	sequence004:34823..>35482(-)	partial			WP_003546584.1	phospho-sugar mutase	100.0	38.2	89.5
MGA_217	LOCUS_02110	sequence006:9468..9617(+)	partial			WP_011254000.1	S4 domain-containing protein YaaA	100.0	64.5	67.3
MGA_322	LOCUS_03130	sequence009:21488..>23755(-)	partial			WP_003547069.1	DNA polymerase III subunit alpha	100.0	72.9	66.2
MGA_342	LOCUS_03330	sequence010:22254..23078(-)	partial			WP_003549642.1	helix-turn-helix transcriptional regulator	73.0	74.3	31.1
MGA_371	LOCUS_03610	sequence012:9469..11466(-)	partial			WP_011476570.1	AAA family ATPase	98.0	68.2	34.9
MGA_374	LOCUS_03640	sequence012:13908..15902(-)	partial			WP_010942605.1	glycosyltransferase	14.3	31.5	43.2
MGA_382	LOCUS_03720	sequence013:1..555(+)	partial			WP_011254029.1	MBL fold metallo-hydrolase	100.0	69.4	71.2
MGA_426	LOCUS_04150	sequence015:2772..3539(-)	partial			WP_000190248.1	DnaD domain protein	49.0	51.6	40.0
MGA_427	LOCUS_04160	sequence015:3549..4364(-)	partial			WP_010905689.1	DUF1071 domain-containing protein	54.2	73.4	34.4
MGA_515	LOCUS_04990	sequence019:1868..2248(+)	internal_stop_codon	2246..2248(+)		WP_011101070.1	LCP family protein	73.8	24.7	45.0
MGA_516	LOCUS_05000	sequence019:2267..2719(+)	internal_stop_codon	2246..2248(+)		WP_003576133.1	LCP family protein	91.3	39.5	38.8
MGA_594	LOCUS_05730	sequence024:3296..3829(-)	partial			WP_011254283.1	DUF4767 domain-containing protein	71.2	62.6	40.5
MGA_604	LOCUS_05830	sequence024:11860..>12831(-)	partial			WP_003546860.1	ribonuclease J	97.2	54.0	71.8
MGA_639	LOCUS_06140	sequence027:4606..4902(+)	partial			WP_003700446.1	YggT family protein	67.3	76.5	59.1
MGA_660	LOCUS_06340	sequence028:10309..10935(+)	partial			WP_011476385.1	histidine phosphatase family protein	74.5	78.6	31.6
MGA_666	LOCUS_06390	sequence029:1621..1770(+)	partial			WP_011948661.1	GNAT family N-acetyltransferase	91.8	29.2	60.0
MGA_697	LOCUS_06660	sequence032:1..619(+)	partial			WP_011254607.1	adenylosuccinate lyase	100.0	47.6	88.3
MGA_707	LOCUS_06760	sequence032:10923..>11681(-)	partial			WP_003549141.1	ABC-F family ATP-binding cassette domain-containing protein	100.0	38.8	72.2
MGA_710	LOCUS_06780	sequence033:1958..2197(+)	frameshift		2191	WP_014565762.1	PTS cellobiose transporter subunit IIC	100.0	17.6	60.8
MGA_711	LOCUS_06790	sequence033:2205..3308(+)	frameshift		2191	WP_014565762.1	PTS cellobiose transporter subunit IIC	99.7	81.3	72.1
MGA_733	LOCUS_06990	sequence034:8776..9198(+)	partial			WP_004080548.1	PAS domain-containing protein	90.7	69.0	31.2
MGA_748	LOCUS_07120	sequence035:9598..10530(+)	frameshift		9553	WP_011836378.1	low temperature requirement protein A	99.0	82.7	30.7
MGA_750	LOCUS_07140	sequence036:1..1569(+)	partial			WP_011254317.1	LPXTG cell wall anchor domain-containing protein	78.4	16.4	40.7
MGA_776	LOCUS_07390	sequence038:1..960(+)	partial			WP_011254060.1	metallophosphoesterase	100.0	68.8	71.6
MGA_791	LOCUS_07530	sequence039:7477..7962(+)	partial			WP_011254200.1	LytTR family DNA-binding domain-containing protein	98.1	58.9	43.0
MGA_815	LOCUS_07750	sequence041:9659..>10389(-)	partial			WP_011254379.1	PhoH family protein	98.8	74.9	85.8
MGA_852	LOCUS_08060	sequence045:3979..6063(+)	partial			WP_003548795.1	beta-N-acetylglucosaminidase AcmB	37.2	64.1	43.8
MGA_853	LOCUS_08070	sequence045:6118..8286(+)	partial			WP_011254618.1	GH25 family lysozyme	34.1	76.2	48.8
MGA_864	LOCUS_08170	sequence047:1..943(+)	partial			WP_011254543.1	DUF4767 domain-containing protein	47.6	39.9	39.7
MGA_887	LOCUS_08380	sequence048:7789..8397(-)	partial			WP_011476070.1	hypothetical protein	39.6	42.3	48.8
MGA_917	LOCUS_08620	sequence051:6418..7440(-)	partial			WP_010905854.1	magnesium-translocating P-type ATPase	90.3	33.8	33.1
MGA_928	LOCUS_08710	sequence052:6568..6843(-)	partial			WP_012546378.1	helix-turn-helix transcriptional regulator	93.4	66.9	37.9
MGA_933	LOCUS_08750	sequence053:1..1616(+)	partial			WP_003547786.1	single-stranded-DNA-specific exonuclease RecJ	99.6	70.7	63.6
MGA_948	LOCUS_08890	sequence054:7827..8540(+)	partial			WP_011102080.1	DUF4097 domain-containing protein	92.4	59.5	28.6
MGA_951	LOCUS_08920	sequence055:1830..3197(-)	partial			WP_003548276.1	YfhO family protein	91.4	48.9	39.0
MGA_971	LOCUS_09110	sequence057:6485..>8353(-)	partial			WP_003547817.1	PolC-type DNA polymerase III	100.0	43.3	89.5
MGA_1001	LOCUS_09360	sequence061:4466..4723(-)	frameshift,internal_stop_codon	4783..4785(-),4804..4806(-)	4845	WP_003546685.1	DUF3737 family protein	98.8	28.7	42.4
MGA_1002	LOCUS_09370	sequence061:4825..5238(-)	partial			WP_003546685.1	DUF3737 family protein	97.1	44.9	69.9
MGA_1014	LOCUS_09480	sequence063:1..1447(+)	partial			WP_003549627.1	glycoside hydrolase family 65 protein	99.6	63.4	86.8
MGA_1034	LOCUS_09650	sequence065:6091..>7590(-)	partial			WP_011674291.1	transglycosylase domain-containing protein	74.3	39.6	49.9
MGA_1066	LOCUS_09940	sequence069:3286..4104(+)	partial			WP_011254512.1	serine hydrolase	99.3	65.0	52.0
MGA_1071	LOCUS_09980	sequence070:652..957(+)	partial			WP_003546926.1	PTS sugar transporter subunit IIB	69.3	67.6	44.0
MGA_1076	LOCUS_10030	sequence070:5621..6448(+)	partial			WP_003549642.1	helix-turn-helix transcriptional regulator	73.1	74.3	31.1
MGA_1078	LOCUS_10050	sequence070:7053..7415(+)	partial			WP_011254599.1	ABC transporter ATP-binding protein	99.2	20.3	44.5
MGA_1079	LOCUS_10060	sequence071:104..934(-)	partial			WP_011476596.1	ABC transporter ATP-binding protein	71.4	69.1	37.3
MGA_1118	LOCUS_10400	sequence077:1..700(+)	partial			WP_003548882.1	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	99.1	50.1	87.8
MGA_1124	LOCUS_10450	sequence078:1..1362(+)	partial			WP_011254252.1	valine--tRNA ligase	100.0	51.5	83.9
MGA_1140	LOCUS_10590	sequence079:6075..>7047(-)	partial			WP_003548049.1	YSIRK-type signal peptide-containing protein	57.3	4.8	41.4
MGA_1146	LOCUS_10640	sequence080:6172..>7005(-)	partial			WP_005174157.1	amino acid permease	84.8	43.4	34.5
MGA_1192	LOCUS_11030	sequence087:482..820(-)	partial			WP_003549798.1	DUF3021 domain-containing protein	88.4	72.3	64.6
MGA_1194	LOCUS_11050	sequence087:1779..1940(+)	frameshift		1916	WP_003547312.1	aldo/keto reductase	69.8	12.8	91.9
MGA_1195	LOCUS_11060	sequence087:1949..2332(+)	frameshift		1916	WP_003547312.1	aldo/keto reductase	100.0	44.1	81.1
MGA_1208	LOCUS_11170	sequence089:1541..3040(+)	partial			WP_010773698.1	LPXTG cell wall anchor domain-containing protein	25.3	37.3	38.6
MGA_1238	LOCUS_11400	sequence093:4791..5378(+)	partial			WP_011254347.1	Fic family protein	49.2	78.2	48.5
MGA_1241	LOCUS_11410	sequence094:979..2097(-)	frameshift		987	WP_011460717.1	IS4 family transposase	95.7	78.8	34.7
MGA_1250	LOCUS_11480	sequence096:1877..2122(-)	frameshift		2154	WP_003548575.1	ABC transporter ATP-binding protein	95.1	14.5	62.3
MGA_1251	LOCUS_11490	sequence096:2137..3465(-)	frameshift		2154	WP_003548575.1	ABC transporter ATP-binding protein	99.1	82.6	41.3
MGA_1253	LOCUS_11510	sequence096:4685..4834(-)	partial			WP_003548066.1	type II toxin-antitoxin system prevent-host-death family antitoxin	87.8	47.8	79.5
MGA_1255	LOCUS_11530	sequence097:1..876(+)	partial			WP_011254525.1	MMPL family transporter	97.6	22.9	63.5
MGA_1261	LOCUS_11590	sequence098:1..1617(+)	partial			WP_003548819.1	LTA synthase family protein	99.8	54.1	58.3
MGA_1265	LOCUS_11630	sequence098:5434..>5994(-)	partial			WP_011254075.1	C1 family peptidase	99.5	42.2	70.8
MGA_1269	LOCUS_11670	sequence099:2650..3138(-)	partial			WP_003548672.1	DUF805 domain-containing protein	100.0	47.9	33.5
MGA_1306	LOCUS_11960	sequence105:1..915(+)	partial			WP_003549508.1	heavy metal translocating P-type ATPase	100.0	48.5	72.7
MGA_1331	LOCUS_12170	sequence108:1772..2059(-)	partial			WP_003546311.1	uracil-DNA glycosylase family protein	64.2	31.3	90.2
MGA_1354	LOCUS_12380	sequence112:4257..>5270(-)	partial			WP_011254583.1	glycoside hydrolase family 31 protein	99.1	43.7	75.0
MGA_1355	LOCUS_12390	sequence113:561..1214(+)	partial			WP_172824474.1	sensor histidine kinase	96.3	48.4	51.7
MGA_1357	LOCUS_12410	sequence113:1931..2347(+)	frameshift		2281	WP_011475507.1	extracellular solute-binding protein	85.5	26.7	36.4
MGA_1358	LOCUS_12420	sequence113:2347..3147(+)	frameshift		2287	WP_002263458.1	extracellular solute-binding protein	98.9	62.8	33.3
MGA_1362	LOCUS_12450	sequence114:1..536(+)	partial			WP_011100893.1	alpha/beta hydrolase	98.9	67.3	30.7
MGA_1368	LOCUS_12500	sequence115:1..778(+)	partial			WP_011254389.1	GNAT family N-acetyltransferase	99.2	66.2	42.1
MGA_1373	LOCUS_12550	sequence115:4572..>5160(-)	partial			WP_003546960.1	DegV family protein	99.5	70.0	49.0
MGA_1383	LOCUS_12630	sequence118:1..1132(+)	partial			WP_011254197.1	KUP/HAK/KT family potassium transporter	100.0	56.0	75.3
MGA_1387	LOCUS_12660	sequence119:185..955(+)	internal_stop_codon	953..955(+)		WP_135960404.1	MFS transporter	100.0	64.2	90.2
MGA_1413	LOCUS_12880	sequence123:3412..>4740(-)	partial			WP_003546793.1	penicillin-binding protein	99.8	61.4	58.5
MGA_1416	LOCUS_12910	sequence124:2134..2310(+)	internal_stop_codon	2308..2310(+)		WP_003547799.1	ATP-binding cassette domain-containing protein	98.3	11.3	73.7
MGA_1417	LOCUS_12920	sequence124:2368..3138(+)	internal_stop_codon	2308..2310(+)		WP_003547799.1	ATP-binding cassette domain-containing protein	94.5	48.3	67.1
MGA_1437	LOCUS_13060	sequence129:1..643(+)	partial			WP_003548688.1	alpha/beta hydrolase	98.6	68.5	69.2
MGA_1443	LOCUS_13110	sequence130:1..975(+)	partial			WP_002399157.1	DNA mismatch repair protein MutS	98.5	48.0	45.3
MGA_1447	LOCUS_13140	sequence131:723..1673(+)	partial			WP_003548485.1	mucus-binding protein	92.4	42.6	37.9
MGA_1450	LOCUS_13160	sequence132:1..533(+)	partial			WP_011101678.1	cysteine desulfurase family protein	100.0	45.6	58.5
MGA_1463	LOCUS_13260	sequence134:3798..>4433(-)	partial			WP_003548899.1	HD domain-containing protein	99.5	46.5	72.0
MGA_1467	LOCUS_13290	sequence136:1..781(+)	partial			WP_025014283.1	NCS2 family permease	99.6	59.3	86.0
MGA_1516	LOCUS_13650	sequence147:321..2984(-)	partial			WP_003548485.1	mucus-binding protein	54.9	77.1	35.2
MGA_1526	LOCUS_13720	sequence149:2992..>3868(-)	partial			WP_011254413.1	oligopeptide ABC transporter substrate-binding protein	100.0	49.7	54.3
MGA_1535	LOCUS_13780	sequence151:2811..>3856(-)	partial			WP_011254308.1	ATP-dependent protease ATPase subunit HslU	99.4	74.7	77.3
MGA_1540	LOCUS_13800	sequence153:102..575(-)	frameshift		579,230	WP_003550089.1	helix-turn-helix transcriptional regulator	69.4	38.2	45.9
MGA_1541	LOCUS_13810	sequence153:547..762(-)	frameshift		579	WP_003550089.1	helix-turn-helix transcriptional regulator	85.9	21.4	73.8
MGA_1555	LOCUS_13920	sequence156:28..594(+)	partial			WP_002211863.1	MFS transporter	95.2	39.6	30.7
MGA_1571	LOCUS_14020	sequence161:2005..2292(+)	internal_stop_codon	2290..2292(+)		WP_117118503.1	IS3 family transposase	100.0	22.0	57.9
MGA_1572	LOCUS_14030	sequence161:2766..2978(+)	frameshift,internal_stop_codon	2653..2655(+)	2739,2967	WP_117118503.1	IS3 family transposase	95.7	15.5	89.6
MGA_1573	LOCUS_14040	sequence161:2962..3435(+)	frameshift		2739,2967	WP_117118503.1	IS3 family transposase	68.8	25.1	86.1
MGA_1585	LOCUS_14130	sequence164:2328..3386(-)	partial			WP_021721608.1	ABC transporter ATP-binding protein	99.7	56.2	85.2
MGA_1588	LOCUS_14160	sequence165:1854..2390(-)	partial			WP_011254533.1	PAS domain-containing protein	92.7	70.4	33.9
MGA_1592	LOCUS_14190	sequence166:2737..>3322(-)	partial			WP_003549788.1	ABC transporter ATP-binding protein	100.0	65.1	68.6
MGA_1597	LOCUS_14230	sequence167:2536..2769(-)	partial			WP_003547285.1	arginase family protein	96.1	25.8	68.9
MGA_1611	LOCUS_14300	sequence171:1..1108(+)	partial			WP_182528942.1	Eco57I restriction-modification methylase domain-containing protein	25.0	28.0	33.3
MGA_1632	LOCUS_14420	sequence177:1754..2914(-)	partial			WP_003548782.1	peptidase M13	98.7	58.8	53.4
MGA_1662	LOCUS_14600	sequence185:3..290(+)	partial			WP_003546159.1	NADPH-dependent oxidoreductase	100.0	37.7	89.5
MGA_1664	LOCUS_14620	sequence185:774..1319(+)	partial			WP_000656771.1	TetR/AcrR family transcriptional regulator	50.8	47.8	40.4
MGA_1678	LOCUS_14700	sequence189:1199..1462(-)	internal_stop_codon	1463..1465(-)		WP_011254231.1	beta-glucoside-specific PTS transporter subunit IIABC	66.7	8.7	86.2
MGA_1679	LOCUS_14710	sequence189:1692..1838(-)	internal_stop_codon	1866..1868(-)		WP_003546647.1	PRD domain-containing protein	100.0	17.1	87.5
MGA_1680	LOCUS_14720	sequence189:1866..2534(-)	internal_stop_codon	1866..1868(-)		WP_003546647.1	PRD domain-containing protein	98.2	77.9	65.1
MGA_1685	LOCUS_14760	sequence191:1..684(+)	partial			WP_003547140.1	type I DNA topoisomerase	99.6	32.1	86.7
MGA_1690	LOCUS_14790	sequence192:1911..>2791(-)	partial			WP_011101264.1	thiol reductant ABC exporter subunit CydD	96.9	44.0	44.2
MGA_1694	LOCUS_14820	sequence193:1565..2005(-)	internal_stop_codon	2060..2062(-)		WP_011921897.1	NADP-dependent oxidoreductase	100.0	43.8	50.0
MGA_1695	LOCUS_14830	sequence193:2060..2401(-)	internal_stop_codon	2060..2062(-)		WP_000861516.1	NADP-dependent oxidoreductase	100.0	33.8	59.3
MGA_1721	LOCUS_15010	sequence200:681..>2550(-)	partial			WP_011836740.1	SP_1767 family glycosyltransferase	99.8	57.2	36.3
MGA_1732	LOCUS_15090	sequence204:1..918(+)	partial			WP_003549508.1	heavy metal translocating P-type ATPase	99.7	48.5	72.0
MGA_1735	LOCUS_15120	sequence205:1870..>2397(-)	partial			WP_093649644.1	ISL3 family transposase	92.0	25.3	34.8
MGA_1740	LOCUS_15150	sequence207:220..1029(-)	frameshift		234	WP_014565478.1	SLAP domain-containing protein	98.1	64.7	59.4
MGA_1742	LOCUS_15170	sequence208:1..579(+)	partial			WP_003546680.1	class I SAM-dependent methyltransferase	96.9	55.9	62.4
MGA_1756	LOCUS_15280	sequence211:1841..2182(+)	partial			WP_011101950.1	type II toxin-antitoxin system PemK/MazF family toxin	65.5	64.3	50.0
MGA_1762	LOCUS_15300	sequence213:207..1139(-)	partial			WP_003549938.1	MupG family TIM beta-alpha barrel fold protein	78.7	69.1	58.2
MGA_1765	LOCUS_15320	sequence214:1..798(+)	partial			WP_003549790.1	ABC transporter permease	98.1	64.5	54.6
MGA_1766	LOCUS_15330	sequence214:882..1664(+)	internal_stop_codon	1662..1664(+)		WP_011254583.1	glycoside hydrolase family 31 protein	98.8	33.5	63.0
MGA_1771	LOCUS_15360	sequence216:179..1585(-)	partial			WP_004186184.1	ISL3-like element ISBma1 family transposase	70.9	72.9	28.0
MGA_1774	LOCUS_15380	sequence217:1166..>2255(-)	partial			WP_003547166.1	putative ornithine decarboxylase	99.7	51.8	74.5
MGA_1805	LOCUS_15580	sequence227:171..779(-)	internal_stop_codon	171..173(-)		WP_003547613.1	class I SAM-dependent methyltransferase	92.1	81.6	61.3