{
    "type": "genome",
    "identifier": "GCA_022785485.1",
    "organism": "Selenomonadales bacterium",
    "title": "Selenomonadales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "AAFC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022785485.1",
        "bioproject": "PRJNA629856",
        "biosample": "SAMN26526153",
        "wgs_master": "JALFQW000000000.1",
        "refseq_category": "na",
        "taxid": "2137878",
        "species_taxid": "2137878",
        "organism_name": "Selenomonadales bacterium",
        "infraspecific_name": "",
        "isolate": "SUG929",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/01",
        "asm_name": "ASM2278548v1",
        "submitter": "AAFC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/785/485/GCA_022785485.1_ASM2278548v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-01",
    "dateModified": "2022-04-01",
    "datePublished": "2022-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Selenomonadales bacterium"
        ],
        "sample_taxid": [
            "2137878"
        ],
        "sample_host_organism": [
            "Sus scrofa domesticus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Lacombe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.647 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 85.56,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2272528",
        "Number of Sequences": "320",
        "Longest Sequences (bp)": "40852",
        "N50 (bp)": "10109",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.4",
        "Number of CDSs": "1917",
        "Average Protein Length": "307.4",
        "Coding Ratio (%)": "77.8",
        "Number of rRNAs": "3",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Anaerovibrio slackiae",
                "strain": "strain=WCA-693-APC-5D-A",
                "accession": "GCA_009695585.1",
                "taxid": 2652309,
                "species_taxid": 2652309,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0877,
                "matched_fragments": 91,
                "total_fragments": 589,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerovibrio lipolyticus",
                "strain": "strain=DSM 3074",
                "accession": "GCA_900141865.1",
                "taxid": 82374,
                "species_taxid": 82374,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0638,
                "matched_fragments": 102,
                "total_fragments": 589,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 85.56,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_002100115.1",
                "gtdb_species": "s__Anaerovibrio sp002100115",
                "ani": 78.2541,
                "matched_fragments": 89,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900548165.1",
                "gtdb_species": "s__Anaerovibrio sp900548165",
                "ani": 78.112,
                "matched_fragments": 113,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.97",
                "min_intra_species_ani": "96.65",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_009695585.1",
                "gtdb_species": "s__Anaerovibrio slackiae",
                "ani": 78.0877,
                "matched_fragments": 91,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.28",
                "min_intra_species_ani": "97.88",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCF_000621545.1",
                "gtdb_species": "s__Anaerovibrio lipolyticus_A",
                "ani": 78.0488,
                "matched_fragments": 97,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900141865.1",
                "gtdb_species": "s__Anaerovibrio lipolyticus",
                "ani": 78.0301,
                "matched_fragments": 103,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.47",
                "min_intra_species_ani": "96.05",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902786545.1",
                "gtdb_species": "s__Anaerovibrio sp902786545",
                "ani": 77.8669,
                "matched_fragments": 62,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.48",
                "min_intra_species_ani": "96.70",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017390245.1",
                "gtdb_species": "s__Anaerovibrio sp017390245",
                "ani": 77.4813,
                "matched_fragments": 70,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900768695.1",
                "gtdb_species": "s__Anaerovibrio sp900768695",
                "ani": 77.0923,
                "matched_fragments": 55,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016302095.1",
                "gtdb_species": "s__Anaerovibrio sp016302095",
                "ani": 77.0769,
                "matched_fragments": 56,
                "total_fragments": 589,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Anaerovibrio",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.197,
        "cell_length": 0.508,
        "doubling_h": 0.9,
        "growth_tmp": 34.639,
        "optimum_tmp": 35.546,
        "optimum_ph": 7.045,
        "genome_size": 3480146.462,
        "gc_content": 49.632,
        "coding_genes": 2587.0,
        "rRNA16S_genes": 5.333,
        "tRNA_genes": 60.0,
        "gram_stain": 0.075,
        "sporulation": 0.352,
        "motility": 0.843,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.888,
        "thermophilic_range_tmp": 0.111,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.531,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.468,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Selenomonadales",
        "f__Selenomonadaceae",
        "g__CAMCDL01",
        "s__CAMCDL01 sp945637225"
    ],
    "_genome_taxon": [
        "Selenomonadales",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_C",
        "c__Negativicutes",
        "o__Selenomonadales",
        "f__Selenomonadaceae",
        "g__CAMCDL01",
        "s__CAMCDL01 sp945637225",
        "Bacteria",
        "Bacillota",
        "C",
        "Negativicutes",
        "Selenomonadales",
        "Selenomonadaceae",
        "CAMCDL01",
        "CAMCDL01",
        "sp945637225"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}