{
    "type": "genome",
    "identifier": "GCA_022795655.1",
    "organism": "Anaerotignum sp.",
    "title": "Anaerotignum sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Oak Ridge National Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022795655.1",
        "bioproject": "PRJNA603829",
        "biosample": "SAMN14273574",
        "wgs_master": "JAAWHE000000000.1",
        "refseq_category": "na",
        "taxid": "2039241",
        "species_taxid": "2039241",
        "organism_name": "Anaerotignum sp.",
        "infraspecific_name": "",
        "isolate": "ABMPRH_124_1_2",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/01",
        "asm_name": "ASM2279565v1",
        "submitter": "Oak Ridge National Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/795/655/GCA_022795655.1_ASM2279565v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-01",
    "dateModified": "2022-04-01",
    "datePublished": "2022-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerotignum sp."
        ],
        "sample_taxid": [
            "2039241"
        ],
        "sample_host_organism": [
            "Mus musculus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Knoxville, TN"
        ],
        "sample_host_location_id": [],
        "data_size": "0.711 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2512188",
        "Number of Sequences": "103",
        "Longest Sequences (bp)": "120530",
        "N50 (bp)": "41885",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.5",
        "Number of CDSs": "2416",
        "Average Protein Length": "289.8",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Anaerotignum faecicola",
                "strain": "strain=KCTC 15736",
                "accession": "GCA_003865035.1",
                "taxid": 2358141,
                "species_taxid": 2358141,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9166,
                "matched_fragments": 195,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum propionicum",
                "strain": "strain=X2",
                "accession": "GCA_001561955.1",
                "taxid": 28446,
                "species_taxid": 28446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7796,
                "matched_fragments": 73,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum propionicum",
                "strain": "strain=DSM 1682",
                "accession": "GCA_900129165.1",
                "taxid": 28446,
                "species_taxid": 28446,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7252,
                "matched_fragments": 72,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum neopropionicum",
                "strain": "strain=DSM-3847",
                "accession": "GCA_001571775.1",
                "taxid": 36847,
                "species_taxid": 36847,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6663,
                "matched_fragments": 76,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerotignum lactatifermentans",
                "strain": "strain=DSM 14214",
                "accession": "GCA_900142265.1",
                "taxid": 160404,
                "species_taxid": 160404,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.6185,
                "matched_fragments": 136,
                "total_fragments": 785,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_910576545.1",
                "gtdb_species": "s__Anaerotignum sp910576545",
                "ani": 98.848,
                "matched_fragments": 749,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.19",
                "min_intra_species_ani": "98.19",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_910578425.1",
                "gtdb_species": "s__Anaerotignum sp910578425",
                "ani": 90.5459,
                "matched_fragments": 650,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016902535.1",
                "gtdb_species": "s__Anaerotignum lactatifermentans_A",
                "ani": 78.302,
                "matched_fragments": 143,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017523325.1",
                "gtdb_species": "s__Anaerotignum sp017523325",
                "ani": 78.0082,
                "matched_fragments": 186,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004557645.1",
                "gtdb_species": "s__Anaerotignum sp004557645",
                "ani": 77.9883,
                "matched_fragments": 165,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003865035.1",
                "gtdb_species": "s__Anaerotignum faecicola",
                "ani": 77.9517,
                "matched_fragments": 193,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.42",
                "min_intra_species_ani": "97.62",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_017483025.1",
                "gtdb_species": "s__Anaerotignum sp017483025",
                "ani": 77.7901,
                "matched_fragments": 134,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900142265.1",
                "gtdb_species": "s__Anaerotignum lactatifermentans",
                "ani": 77.6185,
                "matched_fragments": 136,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.69",
                "min_intra_species_ani": "96.94",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_001304995.1",
                "gtdb_species": "s__Anaerotignum sp001304995",
                "ani": 77.6152,
                "matched_fragments": 126,
                "total_fragments": 785,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Anaerotignaceae;g__Anaerotignum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.57",
                "min_intra_species_ani": "97.74",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 6,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.119,
        "cell_length": 0.356,
        "doubling_h": null,
        "growth_tmp": 33.666,
        "optimum_tmp": 35.5,
        "optimum_ph": null,
        "genome_size": 3286698.333,
        "gc_content": 38.9,
        "coding_genes": 2888.0,
        "rRNA16S_genes": 7.0,
        "tRNA_genes": 61.0,
        "gram_stain": 0.666,
        "sporulation": 0.666,
        "motility": 0.666,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Anaerotignaceae",
        "g__Anaerotignum",
        "s__Anaerotignum sp910576545"
    ],
    "_genome_taxon": [
        "Anaerotignum",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Anaerotignaceae",
        "g__Anaerotignum",
        "s__Anaerotignum sp910576545",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Anaerotignaceae",
        "Anaerotignum",
        "Anaerotignum",
        "sp910576545"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}