{
    "type": "genome",
    "identifier": "GCA_022821045.1",
    "organism": "Gemmatimonadota bacterium",
    "title": "Gemmatimonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Stony Brook University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022821045.1",
        "bioproject": "PRJNA768976",
        "biosample": "SAMN22072931",
        "wgs_master": "JAJEEI000000000.1",
        "refseq_category": "na",
        "taxid": "2026742",
        "species_taxid": "2026742",
        "organism_name": "Gemmatimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "p16x34bins.23",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/06",
        "asm_name": "ASM2282104v1",
        "submitter": "Stony Brook University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/821/045/GCA_022821045.1_ASM2282104v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-06",
    "dateModified": "2022-04-06",
    "datePublished": "2022-04-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Gemmatimonadota bacterium"
        ],
        "sample_taxid": [
            "2026742"
        ],
        "sample_host_organism": [
            "Ircinia sp. 'Massive A pink'"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Panama: Bocas del Toro, Inner Solarte"
        ],
        "sample_host_location_id": [],
        "data_size": "0.927 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3363593",
        "Number of Sequences": "83",
        "Longest Sequences (bp)": "150118",
        "N50 (bp)": "64025",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.7",
        "Number of CDSs": "2756",
        "Average Protein Length": "367.6",
        "Coding Ratio (%)": "90.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Longimicrobium terrae",
                "strain": "strain=CECT 8660",
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            {
                "organism_name": "Longimicrobium terrae",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphaerotilus hippei",
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                "accession": "GCA_003201595.1",
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                "species_taxid": 744406,
                "relation_to_type": "type",
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            },
            {
                "organism_name": "Gemmatirosa kalamazoonensis",
                "strain": "strain=KBS708",
                "accession": "GCA_000522985.1",
                "taxid": 861299,
                "species_taxid": 861299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1647,
                "matched_fragments": 147,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duganella aceris",
                "strain": "strain=SAP-35",
                "accession": "GCA_011090165.1",
                "taxid": 2703883,
                "species_taxid": 2703883,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9298,
                "matched_fragments": 74,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis benzoatilytica",
                "strain": "strain=AK 16/65",
                "accession": "GCA_000383915.1",
                "taxid": 346045,
                "species_taxid": 346045,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8327,
                "matched_fragments": 72,
                "total_fragments": 1080,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis circi",
                "strain": "strain=DSM 45561",
                "accession": "GCA_003385235.1",
                "taxid": 871959,
                "species_taxid": 871959,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6844,
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                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_009840525.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__BD2-11",
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                "num_clustered_genomes": 6,
                "status": "-"
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            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_012267435.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_002238605.1",
                "gtdb_species": "s__BD2-11 sp002238605",
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                "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__BD2-11",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003695865.1",
                "gtdb_species": "s__J028 sp003695865",
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                "gtdb_taxonomy": "d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Longimicrobiales;f__UBA6960;g__J028",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_007692505.1",
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            },
            {
                "accession": "GCA_003242735.1",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
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        "genome_size": null,
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        "coding_genes": null,
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        "sporulation": null,
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        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "f__UBA6960",
        "g__BD2-11",
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    "_genome_taxon": [
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        "p__Gemmatimonadota",
        "c__Gemmatimonadetes",
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        "g__BD2-11",
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        "Bacteria",
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        "Longimicrobiales",
        "UBA6960",
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        "BD2-11",
        "sp022825135"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000754",
            "label": "mangrove"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}