{
    "type": "genome",
    "identifier": "GCA_022824685.1",
    "organism": "Caldilineaceae bacterium",
    "title": "Caldilineaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Stony Brook University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022824685.1",
        "bioproject": "PRJNA768976",
        "biosample": "SAMN22072999",
        "wgs_master": "JAJDZJ000000000.1",
        "refseq_category": "na",
        "taxid": "2614250",
        "species_taxid": "2614250",
        "organism_name": "Caldilineaceae bacterium",
        "infraspecific_name": "",
        "isolate": "jk18x40bins.35",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/06",
        "asm_name": "ASM2282468v1",
        "submitter": "Stony Brook University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/824/685/GCA_022824685.1_ASM2282468v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-06",
    "dateModified": "2022-04-06",
    "datePublished": "2022-04-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Caldilineaceae bacterium"
        ],
        "sample_taxid": [
            "2614250"
        ],
        "sample_host_organism": [
            "Ircinia strobilina"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Belize: Mesoamerican Barrier Reef, Blue Ground"
        ],
        "sample_host_location_id": [],
        "data_size": "1.488 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.37,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5234969",
        "Number of Sequences": "243",
        "Longest Sequences (bp)": "98794",
        "N50 (bp)": "32011",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.5",
        "Number of CDSs": "4371",
        "Average Protein Length": "335.2",
        "Coding Ratio (%)": "84.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Litorilinea aerophila",
                "strain": "strain=ATCC BAA-2444",
                "accession": "GCA_006569185.2",
                "taxid": 1204385,
                "species_taxid": 1204385,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0353,
                "matched_fragments": 120,
                "total_fragments": 1624,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.37,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009840225.1",
                "gtdb_species": "s__Bin5 sp009840225",
                "ani": 82.3907,
                "matched_fragments": 969,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Bin5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.63",
                "min_intra_species_ani": "95.35",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_009841235.1",
                "gtdb_species": "s__Bin5 sp009841235",
                "ani": 82.3501,
                "matched_fragments": 1061,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Bin5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.53",
                "min_intra_species_ani": "95.53",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_011523365.1",
                "gtdb_species": "s__Bin5 sp011523365",
                "ani": 82.3036,
                "matched_fragments": 1029,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Bin5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009838625.1",
                "gtdb_species": "s__Bin5 sp009838625",
                "ani": 81.6819,
                "matched_fragments": 975,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Bin5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.90",
                "min_intra_species_ani": "99.90",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002238445.1",
                "gtdb_species": "s__Bin5 sp002238445",
                "ani": 81.6618,
                "matched_fragments": 931,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Bin5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903858085.1",
                "gtdb_species": "s__Caldilinea sp903858085",
                "ani": 75.5687,
                "matched_fragments": 53,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.57",
                "min_intra_species_ani": "99.47",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002391565.1",
                "gtdb_species": "s__Caldilinea sp002391565",
                "ani": 75.4713,
                "matched_fragments": 69,
                "total_fragments": 1624,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.77",
                "min_intra_species_ani": "99.77",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": -0.155,
        "doubling_h": 0.906,
        "growth_tmp": 54.666,
        "optimum_tmp": 55.0,
        "optimum_ph": 7.5,
        "genome_size": 5143605.4,
        "gc_content": 58.8,
        "coding_genes": 4056.0,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 47.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.333,
        "anaerobic_respiration": 0.333,
        "aerobic_respiration": 0.333,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Caldilineales",
        "f__Caldilineaceae",
        "g__Bin5",
        "s__Bin5 sp022824685"
    ],
    "_genome_taxon": [
        "Caldilineaceae",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Caldilineales",
        "f__Caldilineaceae",
        "g__Bin5",
        "s__Bin5 sp022824685",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Caldilineales",
        "Caldilineaceae",
        "Bin5",
        "Bin5",
        "sp022824685"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}