{
    "type": "genome",
    "identifier": "GCA_022825385.1",
    "organism": "Rhodothermales bacterium",
    "title": "Rhodothermales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Stony Brook University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022825385.1",
        "bioproject": "PRJNA768976",
        "biosample": "SAMN22072832",
        "wgs_master": "JAJDWX000000000.1",
        "refseq_category": "na",
        "taxid": "2306054",
        "species_taxid": "2306054",
        "organism_name": "Rhodothermales bacterium",
        "infraspecific_name": "",
        "isolate": "jk18x25bins.61",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/06",
        "asm_name": "ASM2282538v1",
        "submitter": "Stony Brook University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/825/385/GCA_022825385.1_ASM2282538v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-06",
    "dateModified": "2022-04-06",
    "datePublished": "2022-04-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rhodothermales bacterium"
        ],
        "sample_taxid": [
            "2306054"
        ],
        "sample_host_organism": [
            "Ircinia sp. 'BZ2'"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Belize: Mesoamerican Barrier Reef, Blue Ground"
        ],
        "sample_host_location_id": [],
        "data_size": "0.849 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3020274",
        "Number of Sequences": "49",
        "Longest Sequences (bp)": "212003",
        "N50 (bp)": "110148",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.5",
        "Number of CDSs": "2333",
        "Average Protein Length": "381.3",
        "Coding Ratio (%)": "88.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Rhodocaloribacter litoris",
                "strain": "strain=ISCAR-4553",
                "accession": "GCA_011682235.2",
                "taxid": 2558931,
                "species_taxid": 2558931,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1919,
                "matched_fragments": 65,
                "total_fragments": 982,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009839485.1",
                "gtdb_species": "s__VXPQ01 sp009839485",
                "ani": 80.541,
                "matched_fragments": 576,
                "total_fragments": 982,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__VXPQ01;g__VXPQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.91",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003285105.1",
                "gtdb_species": "s__MEBICO9517 sp003285105",
                "ani": 76.2678,
                "matched_fragments": 65,
                "total_fragments": 982,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBIC09517;g__MEBICO9517",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.96",
                "min_intra_species_ani": "96.85",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_011682235.1",
                "gtdb_species": "s__ISCAR-4553 sp011682235",
                "ani": 76.2209,
                "matched_fragments": 62,
                "total_fragments": 982,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__ISCAR-4553;g__ISCAR-4553",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.204,
        "cell_length": 1.035,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": 33.833,
        "optimum_ph": 7.5,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Rhodothermia",
        "o__Rhodothermales",
        "f__VXPQ01",
        "g__VXPQ01",
        "s__VXPQ01 sp022825385"
    ],
    "_genome_taxon": [
        "Rhodothermales",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Rhodothermia",
        "o__Rhodothermales",
        "f__VXPQ01",
        "g__VXPQ01",
        "s__VXPQ01 sp022825385",
        "Bacteria",
        "Bacteroidota",
        "Rhodothermia",
        "Rhodothermales",
        "VXPQ01",
        "VXPQ01",
        "VXPQ01",
        "sp022825385"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        },
        {
            "id": "MEO_0000023",
            "label": "sea"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}