{
    "type": "genome",
    "identifier": "GCA_022826965.1",
    "organism": "Dehalococcoidia bacterium",
    "title": "Dehalococcoidia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Stony Brook University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_022826965.1",
        "bioproject": "PRJNA768976",
        "biosample": "SAMN22072672",
        "wgs_master": "JAJDTU000000000.1",
        "refseq_category": "na",
        "taxid": "2026734",
        "species_taxid": "2026734",
        "organism_name": "Dehalococcoidia bacterium",
        "infraspecific_name": "",
        "isolate": "jk18x1bzbins.41",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/04/06",
        "asm_name": "ASM2282696v1",
        "submitter": "Stony Brook University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/826/965/GCA_022826965.1_ASM2282696v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-04-06",
    "dateModified": "2022-04-06",
    "datePublished": "2022-04-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Dehalococcoidia bacterium"
        ],
        "sample_taxid": [
            "2026734"
        ],
        "sample_host_organism": [
            "Ircinia felix"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Belize: Mesoamerican Barrier Reef, Carrie Bow Cay"
        ],
        "sample_host_location_id": [],
        "data_size": "0.830 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3002002",
        "Number of Sequences": "14",
        "Longest Sequences (bp)": "699511",
        "N50 (bp)": "463807",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.0",
        "Number of CDSs": "2815",
        "Average Protein Length": "324.1",
        "Coding Ratio (%)": "91.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Tepidiforma bonchosmolovskayae",
                "strain": "strain=3753O",
                "accession": "GCA_008838325.1",
                "taxid": 2601677,
                "species_taxid": 2601677,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6057,
                "matched_fragments": 57,
                "total_fragments": 996,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoplanes teichomyceticus",
                "strain": "strain=ATCC 31121",
                "accession": "GCA_003711105.1",
                "taxid": 1867,
                "species_taxid": 1867,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9869,
                "matched_fragments": 66,
                "total_fragments": 996,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoplanes teichomyceticus",
                "strain": "strain=NBRC 13999",
                "accession": "GCA_016862415.1",
                "taxid": 1867,
                "species_taxid": 1867,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9016,
                "matched_fragments": 65,
                "total_fragments": 996,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseiarcus fermentans",
                "strain": "strain=DSM 24875",
                "accession": "GCA_003315135.1",
                "taxid": 1473586,
                "species_taxid": 1473586,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.874,
                "matched_fragments": 63,
                "total_fragments": 996,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium isbiliense",
                "strain": "strain=DSM 17168",
                "accession": "GCA_022179325.1",
                "taxid": 315478,
                "species_taxid": 315478,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.5799,
                "matched_fragments": 61,
                "total_fragments": 996,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009838735.1",
                "gtdb_species": "s__Bin125 sp009838735",
                "ani": 82.2189,
                "matched_fragments": 686,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Bin125;f__Bin125;g__Bin125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.51",
                "min_intra_species_ani": "95.66",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_009838915.1",
                "gtdb_species": "s__Bin125 sp009838915",
                "ani": 80.8711,
                "matched_fragments": 606,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Bin125;f__Bin125;g__Bin125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.62",
                "min_intra_species_ani": "97.86",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002239025.1",
                "gtdb_species": "s__Bin125 sp002239025",
                "ani": 80.1756,
                "matched_fragments": 613,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Bin125;f__Bin125;g__Bin125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007571275.1",
                "gtdb_species": "s__Bin125 sp007571275",
                "ani": 79.6071,
                "matched_fragments": 432,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Bin125;f__Bin125;g__Bin125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009841435.1",
                "gtdb_species": "s__UBA2991 sp009841435",
                "ani": 76.3215,
                "matched_fragments": 74,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Tepidiformales;f__Tepidiformaceae;g__UBA2991",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.17",
                "min_intra_species_ani": "95.58",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_009837285.1",
                "gtdb_species": "s__VXMT01 sp009837285",
                "ani": 75.891,
                "matched_fragments": 82,
                "total_fragments": 996,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__VXMT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.62",
                "min_intra_species_ani": "95.50",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__Bin125",
        "f__Bin125",
        "g__Bin125",
        "s__Bin125 sp022826965"
    ],
    "_genome_taxon": [
        "Dehalococcoidia",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__Bin125",
        "f__Bin125",
        "g__Bin125",
        "s__Bin125 sp022826965",
        "Bacteria",
        "Chloroflexota",
        "Dehalococcoidia",
        "Bin125",
        "Bin125",
        "Bin125",
        "Bin125",
        "sp022826965"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}