{ "type": "genome", "identifier": "GCA_022839115.1", "organism": "Methanomicrobiaceae archaeon", "title": "Methanomicrobiaceae archaeon", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Colorado State University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022839115.1", "bioproject": "PRJNA818325", "biosample": "SAMN26856707", "wgs_master": "JALHEK000000000.1", "refseq_category": "na", "taxid": "2716262", "species_taxid": "2716262", "organism_name": "Methanomicrobiaceae archaeon", "infraspecific_name": "", "isolate": "2-no_aug_S1_037", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/08", "asm_name": "ASM2283911v1", "submitter": "Colorado State University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/839/115/GCA_022839115.1_ASM2283911v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-08", "dateModified": "2022-04-08", "datePublished": "2022-04-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Methanomicrobiaceae archaeon" ], "sample_taxid": [ "2716262" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "0.387 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 83.68, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1355982", "Number of Sequences": "293", "Longest Sequences (bp)": "36392", "N50 (bp)": "7111", "Gap Ratio (%)": "0.250298", "GCcontent (%)": "60.0", "Number of CDSs": "1250", "Average Protein Length": "251.3", "Coding Ratio (%)": "69.5", "Number of rRNAs": "0", "Number of tRNAs": "25", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Methanoculleus marisnigri", "strain": "strain=JR1", "accession": "GCA_000015825.1", "taxid": 2198, "species_taxid": 2198, "relation_to_type": "type", "validated": true, "ani": 81.4253, "matched_fragments": 249, "total_fragments": 298, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanoculleus sediminis", "strain": "strain=S3Fa", "accession": "GCA_001017125.1", "taxid": 1550566, "species_taxid": 1550566, "relation_to_type": "type", "validated": true, "ani": 81.3956, "matched_fragments": 249, "total_fragments": 298, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methanoculleus horonobensis", "strain": "strain=T10", 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