{ "type": "genome", "identifier": "GCA_022841365.1", "organism": "Chitinophagaceae bacterium", "title": "Chitinophagaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Northeastern University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022841365.1", "bioproject": "PRJNA764197", "biosample": "SAMN21474431", "wgs_master": "JALHRP000000000.1", "refseq_category": "na", "taxid": "1869212", "species_taxid": "1869212", "organism_name": "Chitinophagaceae bacterium", "infraspecific_name": "", "isolate": "maxbin.180", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/08", "asm_name": "ASM2284136v1", "submitter": "Northeastern University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/841/365/GCA_022841365.1_ASM2284136v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-08", "dateModified": "2022-04-08", "datePublished": "2022-04-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Chitinophagaceae bacterium" ], "sample_taxid": [ "1869212" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Ann Arbor, Michigan" ], "sample_host_location_id": [], "data_size": "1.292 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.38, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4560916", "Number of Sequences": "326", "Longest Sequences (bp)": "199731", "N50 (bp)": "51067", "Gap Ratio (%)": "0.005701", "GCcontent (%)": "40.0", "Number of CDSs": "3903", "Average Protein Length": "318.4", "Coding Ratio (%)": "81.7", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lacibacter cauensis", "strain": "strain=CGMCC 1.7271", "accession": "GCA_007830055.1", "taxid": 510947, "species_taxid": 510947, "relation_to_type": "type", "validated": true, "ani": 79.4089, "matched_fragments": 565, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lacibacter luteus", "strain": "strain=TTM-7", "accession": "GCA_004118265.1", "taxid": 2508719, "species_taxid": 2508719, "relation_to_type": "type", "validated": true, "ani": 79.113, "matched_fragments": 585, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavihumibacter stibioxidans", "strain": "strain=YS-17", "accession": "GCA_014332695.1", "taxid": 1834163, "species_taxid": 1834163, "relation_to_type": "type", "validated": true, "ani": 76.4283, "matched_fragments": 73, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ferruginibacter albus", "strain": "strain=KIS38-8", "accession": "GCA_020042285.1", "taxid": 2875540, "species_taxid": 2875540, "relation_to_type": "type", "validated": true, "ani": 76.4224, "matched_fragments": 90, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Panacibacter microcysteis", "strain": "strain=DH6", "accession": "GCA_015831355.1", "taxid": 2793269, "species_taxid": 2793269, "relation_to_type": "type", "validated": true, "ani": 76.4174, "matched_fragments": 74, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Filimonas lacunae", "strain": "strain=DSM 21054", "accession": "GCA_900156765.1", "taxid": 477680, "species_taxid": 477680, "relation_to_type": "type", "validated": true, "ani": 76.094, "matched_fragments": 66, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niabella ginsengisoli", "strain": "strain=GR10-1", "accession": "GCA_022513635.1", "taxid": 522298, "species_taxid": 522298, "relation_to_type": "type", "validated": true, "ani": 76.0277, "matched_fragments": 69, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavisolibacter ginsengisoli", "strain": "strain=DSM 18119", "accession": "GCA_900129295.1", "taxid": 462367, "species_taxid": 462367, "relation_to_type": "type", "validated": true, "ani": 75.9906, "matched_fragments": 57, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Terrimonas ferruginea", "strain": "strain=DSM 30193", "accession": "GCA_000425585.1", "taxid": 249, "species_taxid": 249, "relation_to_type": "type", "validated": true, "ani": 75.8062, "matched_fragments": 60, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niabella beijingensis", "strain": "strain=3A5MI-3", "accession": "GCA_020034665.1", "taxid": 2872700, "species_taxid": 2872700, "relation_to_type": "type", "validated": true, "ani": 75.8044, "matched_fragments": 60, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinophaga ginsengisegetis", "strain": "strain=DSM 18108", "accession": "GCA_900168065.1", "taxid": 393003, "species_taxid": 393003, "relation_to_type": "type", "validated": true, "ani": 75.6713, "matched_fragments": 60, "total_fragments": 1364, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gynurincola endophyticus", "strain": "strain=HBUM179779", "accession": "GCA_003991195.1", "taxid": 2479004, "species_taxid": 2479004, "relation_to_type": "type", "validated": true, "ani": 75.5408, 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