{ "type": "genome", "identifier": "GCA_022842045.1", "organism": "Arenimonas sp.", "title": "Arenimonas sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Northeastern University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_022842045.1", "bioproject": "PRJNA764197", "biosample": "SAMN21474398", "wgs_master": "JALHQI000000000.1", "refseq_category": "na", "taxid": "1872635", "species_taxid": "1872635", "organism_name": "Arenimonas sp.", "infraspecific_name": "", "isolate": "bin.78_sub", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/08", "asm_name": "ASM2284204v1", "submitter": "Northeastern University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/842/045/GCA_022842045.1_ASM2284204v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-08", "dateModified": "2022-04-08", "datePublished": "2022-04-08", "_annotation": { "sample_count": 1, "sample_organism": [ "Arenimonas sp." ], "sample_taxid": [ "1872635" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Ann Arbor, Michigan" ], "sample_host_location_id": [], "data_size": "0.834 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3082973", "Number of Sequences": "126", "Longest Sequences (bp)": "167996", "N50 (bp)": "39093", "Gap Ratio (%)": "0.025949", "GCcontent (%)": "69.8", "Number of CDSs": "2763", "Average Protein Length": "327.8", "Coding Ratio (%)": "88.1", "Number of rRNAs": "0", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Arenimonas metalli", "strain": "strain=CF5-1", "accession": "GCA_000747155.1", "taxid": 948077, "species_taxid": 948077, "relation_to_type": "type", "validated": true, "ani": 92.3744, "matched_fragments": 788, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas malthae", "strain": "strain=CC-JY-1", "accession": "GCA_000747075.1", "taxid": 354197, "species_taxid": 354197, "relation_to_type": "type", "validated": true, "ani": 86.4256, "matched_fragments": 666, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas terrae", "strain": "strain=R29", "accession": "GCA_006265115.1", "taxid": 2546226, "species_taxid": 2546226, 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"status": "below_threshold" }, { "organism_name": "Luteimonas lumbrici", "strain": "strain=1.1416", "accession": "GCA_006476065.1", "taxid": 2559601, "species_taxid": 2559601, "relation_to_type": "type", "validated": true, "ani": 80.4003, "matched_fragments": 436, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas oryziterrae", "strain": "strain=YC6267", "accession": "GCA_000747135.1", "taxid": 498055, "species_taxid": 498055, "relation_to_type": "type", "validated": true, "ani": 80.1096, "matched_fragments": 505, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas oryziterrae", "strain": "strain=DSM 21050", "accession": "GCA_000420545.1", "taxid": 498055, "species_taxid": 498055, "relation_to_type": "type", "validated": true, "ani": 80.1023, "matched_fragments": 501, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas 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