{ "type": "genome", "identifier": "GCA_023150935.1", "organism": "Candidatus Binatia bacterium", "title": "Candidatus Binatia bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "NanJing University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_023150935.1", "bioproject": "PRJNA797516", "biosample": "SAMN25008089", "wgs_master": "JAKLJW000000000.1", "refseq_category": "na", "taxid": "2838779", "species_taxid": "2838779", "organism_name": "Candidatus Binatia bacterium", "infraspecific_name": "", "isolate": "MAG.286", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/04/27", "asm_name": "ASM2315093v1", "submitter": "NanJing University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/150/935/GCA_023150935.1_ASM2315093v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-04-27", "dateModified": "2022-04-27", "datePublished": "2022-04-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Binatia bacterium" ], "sample_taxid": [ "2838779" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Nanjing" ], "sample_host_location_id": [], "data_size": "1.483 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.55, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5317726", "Number of Sequences": "198", "Longest Sequences (bp)": "516676", "N50 (bp)": "100699", "Gap Ratio (%)": "0.017583", "GCcontent (%)": "66.6", "Number of CDSs": "4631", "Average Protein Length": "333.4", "Coding Ratio (%)": "87.1", "Number of rRNAs": "3", "Number of tRNAs": "56", "Number of CRISPRs": "7" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Allochromatium humboldtianum", "strain": "strain=DSM 21881", "accession": "GCA_013385175.1", "taxid": 504901, "species_taxid": 504901, "relation_to_type": "type", "validated": true, "ani": 75.4663, "matched_fragments": 58, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylomagnum ishizawai", "strain": "strain=RS11D-Pr", "accession": "GCA_019670005.1", "taxid": 1760988, "species_taxid": 1760988, "relation_to_type": "type", "validated": true, "ani": 75.309, "matched_fragments": 54, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera propionica", "strain": "strain=KNDSS-Mac4", "accession": "GCA_002245655.1", "taxid": 2019431, "species_taxid": 2019431, "relation_to_type": "type", "validated": true, "ani": 75.2405, "matched_fragments": 56, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas sangjuensis", "strain": "strain=DSM 28345", "accession": "GCA_010211755.1", "taxid": 1503750, "species_taxid": 1503750, "relation_to_type": "type", "validated": true, "ani": 75.2389, "matched_fragments": 87, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plasticicumulans lactativorans", "strain": "strain=DSM 25287", "accession": "GCA_004341245.1", "taxid": 1133106, "species_taxid": 1133106, "relation_to_type": "type", "validated": true, "ani": 75.2095, "matched_fragments": 101, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevundimonas viscosa", "strain": "strain=CGMCC 1.10683", "accession": "GCA_900116065.1", "taxid": 871741, "species_taxid": 871741, "relation_to_type": "type", "validated": true, "ani": 75.1836, "matched_fragments": 66, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera humireducens", "strain": "strain=SgZ-1", "accession": "GCA_001051995.2", "taxid": 1134435, "species_taxid": 1134435, "relation_to_type": "type", "validated": true, "ani": 75.1714, "matched_fragments": 70, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia solanacearum", "strain": "strain=NCPPB 325", "accession": "GCA_015910705.1", "taxid": 305, "species_taxid": 305, "relation_to_type": "type", "validated": true, "ani": 75.1368, "matched_fragments": 59, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia solanacearum", "strain": "strain=K60", "accession": "GCA_002251695.1", "taxid": 305, "species_taxid": 305, "relation_to_type": "type", "validated": true, "ani": 75.1344, "matched_fragments": 59, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoplanes roseus", "strain": "strain=DSM 5909", "accession": "GCA_003258865.1", "taxid": 29409, "species_taxid": 29409, "relation_to_type": "type", "validated": true, "ani": 75.1055, "matched_fragments": 119, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteibacter rhizovicinus", "strain": "strain=LJ96", "accession": "GCA_001887595.1", "taxid": 242606, "species_taxid": 242606, "relation_to_type": "type", "validated": true, "ani": 75.1053, "matched_fragments": 51, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodoplanes elegans", "strain": "strain=DSM 11907", "accession": "GCA_016653355.1", "taxid": 29408, "species_taxid": 29408, "relation_to_type": "type", "validated": true, "ani": 75.0711, "matched_fragments": 127, 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"below_threshold" }, { "organism_name": "Tistlia consotensis", "strain": "strain=DSM 21585", "accession": "GCA_900188055.1", "taxid": 1321365, "species_taxid": 1321365, "relation_to_type": "type", "validated": true, "ani": 74.9778, "matched_fragments": 134, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 74.9232, "matched_fragments": 91, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter versicolor", "strain": "strain=DSM 16678", "accession": "GCA_014195485.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 74.9225, "matched_fragments": 101, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_024925465.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 74.8807, "matched_fragments": 75, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium helvum", "strain": "strain=JCM 30396", "accession": "GCA_010731895.1", "taxid": 1534349, "species_taxid": 1534349, "relation_to_type": "type", "validated": true, "ani": 74.8746, "matched_fragments": 51, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_919586305.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 74.8401, "matched_fragments": 72, "total_fragments": 1700, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium rutilum", "strain": "strain=DSM 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