{ "type": "genome", "identifier": "GCA_023253795.1", "organism": "Methylocystis sp.", "title": "Methylocystis sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "South China Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_023253795.1", "bioproject": "PRJNA730330", "biosample": "SAMN27163917", "wgs_master": "JALRFG000000000.1", "refseq_category": "na", "taxid": "1911079", "species_taxid": "1911079", "organism_name": "Methylocystis sp.", "infraspecific_name": "", "isolate": "JZJ.7", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/05/06", "asm_name": "ASM2325379v1", "submitter": "South China Agricultural University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/253/795/GCA_023253795.1_ASM2325379v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-05-06", "dateModified": "2022-05-06", "datePublished": "2022-05-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Methylocystis sp." ], "sample_taxid": [ "1911079" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Esturies of South China" ], "sample_host_location_id": [], "data_size": "0.580 MB", "sample_ph_range": { "min": 772.0, "max": 772.0 }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 77.78, "contamination": 4.26, "strain_heterogeneity": 60.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2057586", "Number of Sequences": "314", "Longest Sequences (bp)": "42926", "N50 (bp)": "10191", "Gap 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78.2961, "matched_fragments": 231, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus sporium", "strain": "strain=DSM 17706", "accession": "GCA_003113265.1", "taxid": 428, "species_taxid": 428, "relation_to_type": "type", "validated": true, "ani": 78.0692, "matched_fragments": 234, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylosinus sporium", "strain": "strain=DSM 17706", "accession": "GCA_009811675.1", "taxid": 428, "species_taxid": 428, "relation_to_type": "type", "validated": true, "ani": 78.0207, "matched_fragments": 243, "total_fragments": 544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Candidatus Rhodoblastus alkanivorans", "strain": "", "accession": "GCA_022760755.1", "taxid": 2954117, "species_taxid": 2954117, "relation_to_type": "type", "validated": true, "ani": 76.8503, "matched_fragments": 131, "total_fragments": 544, 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