{
    "type": "genome",
    "identifier": "GCA_023387565.1",
    "organism": "Pseudomonadota bacterium",
    "title": "Pseudomonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023387565.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17039725",
        "wgs_master": "JAEWHW000000000.1",
        "refseq_category": "na",
        "taxid": "1977087",
        "species_taxid": "1977087",
        "organism_name": "Pseudomonadota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_PBlB_81",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2338756v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/387/565/GCA_023387565.1_ASM2338756v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudomonadota bacterium"
        ],
        "sample_taxid": [
            "1977087"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Blumenau"
        ],
        "sample_host_location_id": [],
        "data_size": "0.721 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2518148",
        "Number of Sequences": "120",
        "Longest Sequences (bp)": "73694",
        "N50 (bp)": "27711",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.4",
        "Number of CDSs": "2279",
        "Average Protein Length": "302.6",
        "Coding Ratio (%)": "82.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Acinetobacter pecorum",
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                "taxid": 2762215,
                "species_taxid": 2762215,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 724,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Acinetobacter lwoffii",
                "strain": "strain=NCTC5866",
                "accession": "GCA_900699155.1",
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                "species_taxid": 28090,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter lwoffii",
                "strain": "strain=FDAARGOS 1393",
                "accession": "GCA_019048305.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 90.5733,
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                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter pseudolwoffii",
                "strain": "strain=ANC 5044",
                "accession": "GCA_002803605.1",
                "taxid": 2053287,
                "species_taxid": 2053287,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter variabilis",
                "strain": "strain=NIPH 2171",
                "accession": "GCA_000369625.1",
                "taxid": 70346,
                "species_taxid": 70346,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.4943,
                "matched_fragments": 597,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter schindleri",
                "strain": "strain=CIP 107287",
                "accession": "GCA_000368625.1",
                "taxid": 108981,
                "species_taxid": 108981,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.2885,
                "matched_fragments": 523,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter terrae",
                "strain": "strain=ANC 4282",
                "accession": "GCA_013004375.1",
                "taxid": 2731247,
                "species_taxid": 2731247,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.7595,
                "matched_fragments": 420,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter silvestris",
                "strain": "strain=ANC 4999",
                "accession": "GCA_002135235.1",
                "taxid": 1977882,
                "species_taxid": 1977882,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6601,
                "matched_fragments": 255,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter baumannii",
                "strain": "strain=ATCC 19606",
                "accession": "GCA_020911985.1",
                "taxid": 470,
                "species_taxid": 470,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9984,
                "matched_fragments": 208,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acinetobacter baumannii",
                "strain": "strain=PartI-Abaumannii-RM8376",
                "accession": "GCA_022870045.1",
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                "species_taxid": 470,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9977,
                "matched_fragments": 202,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 58.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_001647535.1",
                "gtdb_species": "s__Acinetobacter sp001647535",
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                "matched_fragments": 745,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.56",
                "min_intra_species_ani": "98.54",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000487975.1",
                "gtdb_species": "s__Acinetobacter lwoffii",
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                "matched_fragments": 678,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
                "ani_circumscription_radius": 96.2485,
                "mean_intra_species_ani": "99.52",
                "min_intra_species_ani": "96.36",
                "mean_intra_species_af": "0.98",
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                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCF_014769185.1",
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                "matched_fragments": 668,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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                "mean_intra_species_ani": "96.35",
                "min_intra_species_ani": "96.24",
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                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCF_011058205.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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                "mean_intra_species_ani": "96.87",
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                "num_clustered_genomes": 19,
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            },
            {
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                "gtdb_species": "s__Acinetobacter idrijaensis",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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                "num_clustered_genomes": 6,
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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            },
            {
                "accession": "GCA_002367455.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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            },
            {
                "accession": "GCF_019038395.1",
                "gtdb_species": "s__Acinetobacter sp019038395",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__Acinetobacter",
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                "num_clustered_genomes": 2,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Moraxellaceae",
        "g__Acinetobacter",
        "s__Acinetobacter pecorum"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Moraxellaceae",
        "g__Acinetobacter",
        "s__Acinetobacter pecorum",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Moraxellaceae",
        "Acinetobacter",
        "Acinetobacter",
        "pecorum"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}