{
    "type": "genome",
    "identifier": "GCA_023390155.1",
    "organism": "Actinomycetia bacterium",
    "title": "Actinomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023390155.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17039608",
        "wgs_master": "JAEWDJ000000000.1",
        "refseq_category": "na",
        "taxid": "1883427",
        "species_taxid": "1883427",
        "organism_name": "Actinomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "OH_PBB_92",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2339015v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/390/155/GCA_023390155.1_ASM2339015v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Belem"
        ],
        "sample_host_location_id": [],
        "data_size": "0.881 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 48.15,
        "contamination": 1.39,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3257799",
        "Number of Sequences": "520",
        "Longest Sequences (bp)": "62549",
        "N50 (bp)": "7068",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "70.8",
        "Number of CDSs": "2714",
        "Average Protein Length": "299.7",
        "Coding Ratio (%)": "74.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_013410615.1",
                "taxid": 150025,
                "species_taxid": 150025,
                "relation_to_type": "type",
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                "matched_fragments": 607,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leifsonia aquatica",
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                "accession": "GCA_000469485.1",
                "taxid": 144185,
                "species_taxid": 144185,
                "relation_to_type": "type",
                "validated": true,
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                "status": "below_threshold"
            },
            {
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                "accession": "GCA_014190775.1",
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                "validated": true,
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                "matched_fragments": 611,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leifsonia shinshuensis",
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                "accession": "GCA_013410375.1",
                "taxid": 150026,
                "species_taxid": 150026,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Leifsonia soli",
                "strain": "strain=DSM 23871",
                "accession": "GCA_013408745.1",
                "taxid": 582665,
                "species_taxid": 582665,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.6733,
                "matched_fragments": 546,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces mariniharenae",
                "strain": "strain=NEAU-184",
                "accession": "GCA_008122505.1",
                "taxid": 2604423,
                "species_taxid": 2604423,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.8365,
                "matched_fragments": 382,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces agglutinans",
                "strain": "strain=CFH 90414",
                "accession": "GCA_009647605.1",
                "taxid": 2662258,
                "species_taxid": 2662258,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5976,
                "matched_fragments": 361,
                "total_fragments": 826,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clavibacter michiganensis subsp. tessellarius",
                "strain": "strain=ATCC 33566",
                "accession": "GCA_002240635.1",
                "taxid": 31965,
                "species_taxid": 28447,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2732,
                "matched_fragments": 342,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clavibacter phaseoli",
                "strain": "strain=LPPA 982",
                "accession": "GCA_021922925.1",
                "taxid": 1734031,
                "species_taxid": 1734031,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1876,
                "matched_fragments": 346,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces humatus",
                "strain": "strain=JCM 14319",
                "accession": "GCA_021228295.1",
                "taxid": 279573,
                "species_taxid": 279573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1529,
                "matched_fragments": 329,
                "total_fragments": 826,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 1.39,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCF_000633535.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_014217625.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "accession": "GCA_003367665.1",
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                "accession": "GCF_013359685.1",
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            {
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            },
            {
                "accession": "GCF_013408745.1",
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                "matched_fragments": 544,
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                "num_clustered_genomes": 2,
                "status": "-"
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
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        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "c__Actinomycetes",
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        "f__Microbacteriaceae",
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        "s__Leifsonia sp023390155"
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    "_genome_taxon": [
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        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Microbacteriaceae",
        "g__Leifsonia",
        "s__Leifsonia sp023390155",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Microbacteriaceae",
        "Leifsonia",
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        "sp023390155"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}