{
    "type": "genome",
    "identifier": "GCA_023404415.1",
    "organism": "Bacillota bacterium",
    "title": "Bacillota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023404415.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17045635",
        "wgs_master": "JAEYBJ000000000.1",
        "refseq_category": "na",
        "taxid": "1879010",
        "species_taxid": "1879010",
        "organism_name": "Bacillota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_HDB_71",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2340441v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/404/415/GCA_023404415.1_ASM2340441v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillota bacterium"
        ],
        "sample_taxid": [
            "1879010"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Dourados"
        ],
        "sample_host_location_id": [],
        "data_size": "1.003 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 62.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3553089",
        "Number of Sequences": "458",
        "Longest Sequences (bp)": "39227",
        "N50 (bp)": "9634",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.1",
        "Number of CDSs": "2883",
        "Average Protein Length": "315.9",
        "Coding Ratio (%)": "76.9",
        "Number of rRNAs": "1",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Anaerotruncus massiliensis",
                "strain": "strain=AT3",
                "accession": "GCA_900199635.1",
                "taxid": 1673720,
                "species_taxid": 1673720,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9567,
                "matched_fragments": 60,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura macrotermitis",
                "strain": "strain=RB68",
                "accession": "GCA_009604375.1",
                "taxid": 2585200,
                "species_taxid": 2585200,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9509,
                "matched_fragments": 54,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Crossiella equi",
                "strain": "strain=NRRL B-24104",
                "accession": "GCA_002155995.1",
                "taxid": 130796,
                "species_taxid": 130796,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8467,
                "matched_fragments": 55,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Crossiella equi",
                "strain": "strain=DSM 44580",
                "accession": "GCA_017876755.1",
                "taxid": 130796,
                "species_taxid": 130796,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8043,
                "matched_fragments": 62,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea turkmeniaca",
                "strain": "strain=DSM 43926",
                "accession": "GCA_005889735.1",
                "taxid": 103838,
                "species_taxid": 103838,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7793,
                "matched_fragments": 58,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea zeae",
                "strain": "strain=DSM 100528",
                "accession": "GCA_005889725.1",
                "taxid": 1642303,
                "species_taxid": 1642303,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7247,
                "matched_fragments": 76,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea basaltis",
                "strain": "strain=160415",
                "accession": "GCA_005893125.1",
                "taxid": 2495887,
                "species_taxid": 2495887,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6786,
                "matched_fragments": 89,
                "total_fragments": 959,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 62.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900199405.1",
                "gtdb_species": "s__Onthenecus sp900199405",
                "ani": 98.7033,
                "matched_fragments": 914,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Onthenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018713325.1",
                "gtdb_species": "s__Onthenecus intestinigallinarum",
                "ani": 81.4032,
                "matched_fragments": 415,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Onthenecus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018716525.1",
                "gtdb_species": "s__Ventricola gallistercoris",
                "ani": 77.9342,
                "matched_fragments": 116,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004555535.1",
                "gtdb_species": "s__Ventricola sp004555535",
                "ani": 77.7508,
                "matched_fragments": 182,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004557905.1",
                "gtdb_species": "s__Ventricola sp004557905",
                "ani": 77.6835,
                "matched_fragments": 189,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.75",
                "min_intra_species_ani": "98.68",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_004556985.1",
                "gtdb_species": "s__Ventricola sp004556985",
                "ani": 77.6153,
                "matched_fragments": 170,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900542395.1",
                "gtdb_species": "s__Ventricola sp900542395",
                "ani": 77.4248,
                "matched_fragments": 137,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.33",
                "min_intra_species_ani": "97.06",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_017937505.1",
                "gtdb_species": "s__Ventricola sp017937505",
                "ani": 77.4176,
                "matched_fragments": 190,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017412025.1",
                "gtdb_species": "s__Ventricola sp017412025",
                "ani": 77.1129,
                "matched_fragments": 127,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015056305.1",
                "gtdb_species": "s__Ventricola sp015056305",
                "ani": 77.0856,
                "matched_fragments": 108,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__Ventricola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017399225.1",
                "gtdb_species": "s__UBA11524 sp017399225",
                "ani": 76.7113,
                "matched_fragments": 68,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__UBA11524",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015056155.1",
                "gtdb_species": "s__UBA11524 sp015056155",
                "ani": 76.479,
                "matched_fragments": 85,
                "total_fragments": 959,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__CAG-74;g__UBA11524",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Christensenellales",
        "f__Aristaeellaceae",
        "g__Onthenecus",
        "s__Onthenecus sp900199405"
    ],
    "_genome_taxon": [
        "Bacillota",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Christensenellales",
        "f__Aristaeellaceae",
        "g__Onthenecus",
        "s__Onthenecus sp900199405",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Christensenellales",
        "Aristaeellaceae",
        "Onthenecus",
        "Onthenecus",
        "sp900199405"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}