{
    "type": "genome",
    "identifier": "GCA_023418375.1",
    "organism": "Actinomycetia bacterium",
    "title": "Actinomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023418375.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17040097",
        "wgs_master": "JAEZZV000000000.1",
        "refseq_category": "na",
        "taxid": "1883427",
        "species_taxid": "1883427",
        "organism_name": "Actinomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "OH_PFB_60",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2341837v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/418/375/GCA_023418375.1_ASM2341837v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Fortaleza"
        ],
        "sample_host_location_id": [],
        "data_size": "0.839 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.37,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3163287",
        "Number of Sequences": "377",
        "Longest Sequences (bp)": "60817",
        "N50 (bp)": "10901",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "73.5",
        "Number of CDSs": "2668",
        "Average Protein Length": "311.6",
        "Coding Ratio (%)": "78.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Actinotalea solisilvae",
                "strain": "strain=KACC 19191",
                "accession": "GCA_016464425.1",
                "taxid": 2072922,
                "species_taxid": 2072922,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1241,
                "matched_fragments": 539,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas carbonis",
                "strain": "strain=CGMCC 1.10786",
                "accession": "GCA_014636275.1",
                "taxid": 1386092,
                "species_taxid": 1386092,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.0587,
                "matched_fragments": 502,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas carbonis",
                "strain": "strain=T26",
                "accession": "GCA_000767175.1",
                "taxid": 1386092,
                "species_taxid": 1386092,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.0551,
                "matched_fragments": 489,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinotalea subterranea",
                "strain": "strain=HO-Ch2",
                "accession": "GCA_008364845.1",
                "taxid": 2607497,
                "species_taxid": 2607497,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.9451,
                "matched_fragments": 538,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas hominis",
                "strain": "strain=DSM 9581",
                "accession": "GCA_014201095.1",
                "taxid": 156981,
                "species_taxid": 156981,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.3384,
                "matched_fragments": 449,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas massiliensis",
                "strain": "strain=JC225",
                "accession": "GCA_000312005.1",
                "taxid": 1465811,
                "species_taxid": 1465811,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3128,
                "matched_fragments": 414,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas telluris",
                "strain": "strain=CPCC 204705",
                "accession": "GCA_004886325.1",
                "taxid": 2306636,
                "species_taxid": 2306636,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2707,
                "matched_fragments": 434,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas palmilytica",
                "strain": "strain=EW123",
                "accession": "GCA_021590045.1",
                "taxid": 2608402,
                "species_taxid": 2608402,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2084,
                "matched_fragments": 431,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas cellasea",
                "strain": "strain=NBRC 3753",
                "accession": "GCA_006538745.1",
                "taxid": 43670,
                "species_taxid": 43670,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1899,
                "matched_fragments": 463,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fulva",
                "strain": "strain=DKR-3",
                "accession": "GCA_018531375.1",
                "taxid": 2835530,
                "species_taxid": 2835530,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1829,
                "matched_fragments": 403,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas cellasea",
                "strain": "strain=DSM 20118",
                "accession": "GCA_000767135.1",
                "taxid": 43670,
                "species_taxid": 43670,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.1639,
                "matched_fragments": 395,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas hominis",
                "strain": "strain=NBRC 16055",
                "accession": "GCA_007989225.1",
                "taxid": 156981,
                "species_taxid": 156981,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.1591,
                "matched_fragments": 449,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fimi",
                "strain": "strain=NCTC7547",
                "accession": "GCA_900637695.1",
                "taxid": 1708,
                "species_taxid": 1708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0803,
                "matched_fragments": 459,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas avistercoris",
                "strain": "strain=Sa3CUA2",
                "accession": "GCA_014836445.1",
                "taxid": 2762242,
                "species_taxid": 2762242,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.857,
                "matched_fragments": 421,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulosimicrobium marinum",
                "strain": "strain=NBRC 110994",
                "accession": "GCA_020551945.1",
                "taxid": 1638992,
                "species_taxid": 1638992,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5193,
                "matched_fragments": 387,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sanguibacter keddieii",
                "strain": "strain=DSM 10542",
                "accession": "GCA_000024925.1",
                "taxid": 60920,
                "species_taxid": 60920,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.385,
                "matched_fragments": 339,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Demequina rhizosphaerae",
                "strain": "strain=NBRC 109397",
                "accession": "GCA_000971255.1",
                "taxid": 1638985,
                "species_taxid": 1638985,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8733,
                "matched_fragments": 306,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Demequina gelatinilytica",
                "strain": "strain=NBRC 109390",
                "accession": "GCA_000971115.1",
                "taxid": 1638980,
                "species_taxid": 1638980,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7553,
                "matched_fragments": 259,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Demequina pelophila",
                "strain": "strain=NBRC 109393",
                "accession": "GCA_000971175.1",
                "taxid": 1638984,
                "species_taxid": 1638984,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7052,
                "matched_fragments": 259,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Demequina phytophila",
                "strain": "strain=NBRC 109391",
                "accession": "GCA_000971135.1",
                "taxid": 1638981,
                "species_taxid": 1638981,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7018,
                "matched_fragments": 257,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Demequina salsinemoris",
                "strain": "strain=NBRC 105323",
                "accession": "GCA_000974805.1",
                "taxid": 577470,
                "species_taxid": 577470,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5932,
                "matched_fragments": 241,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus siccus",
                "strain": "strain=R8",
                "accession": "GCA_009906795.1",
                "taxid": 2696567,
                "species_taxid": 2696567,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.0691,
                "matched_fragments": 292,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura decatromicini",
                "strain": "strain=CYP1-5",
                "accession": "GCA_008121305.1",
                "taxid": 2604572,
                "species_taxid": 2604572,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0004,
                "matched_fragments": 312,
                "total_fragments": 872,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.37,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_000767215.1",
                "gtdb_species": "s__Actinotalea fermentans",
                "ani": 87.0543,
                "matched_fragments": 572,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_012514545.1",
                "gtdb_species": "s__Actinotalea sp012514545",
                "ani": 82.7045,
                "matched_fragments": 459,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014042015.1",
                "gtdb_species": "s__Actinotalea sp014042015",
                "ani": 80.2081,
                "matched_fragments": 460,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.62",
                "min_intra_species_ani": "99.62",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_016464425.1",
                "gtdb_species": "s__Actinotalea solisilvae",
                "ani": 80.1443,
                "matched_fragments": 537,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009996735.1",
                "gtdb_species": "s__Actinotalea sp009996735",
                "ani": 80.1061,
                "matched_fragments": 470,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014636275.1",
                "gtdb_species": "s__Actinotalea carbonis",
                "ani": 80.1036,
                "matched_fragments": 498,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_008364845.1",
                "gtdb_species": "s__Actinotalea sp008364845",
                "ani": 79.9485,
                "matched_fragments": 538,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014360395.1",
                "gtdb_species": "s__Actinotalea sp014360395",
                "ani": 79.8268,
                "matched_fragments": 319,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000603945.1",
                "gtdb_species": "s__Actinotalea ferrariae",
                "ani": 79.7816,
                "matched_fragments": 408,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017565425.1",
                "gtdb_species": "s__Actinotalea sp017565425",
                "ani": 79.2646,
                "matched_fragments": 423,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006538745.1",
                "gtdb_species": "s__Cellulomonas cellasea",
                "ani": 79.1946,
                "matched_fragments": 463,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.79",
                "min_intra_species_ani": "95.59",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_003696205.1",
                "gtdb_species": "s__Cellulomonas sp003696205",
                "ani": 79.0746,
                "matched_fragments": 427,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017882855.1",
                "gtdb_species": "s__JADGOR01 sp017882855",
                "ani": 78.5257,
                "matched_fragments": 228,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__JADGOR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002090075.1",
                "gtdb_species": "s__Demequina sp002090075",
                "ani": 77.9053,
                "matched_fragments": 214,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Demequinaceae;g__Demequina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000971115.1",
                "gtdb_species": "s__Demequina gelatinilytica",
                "ani": 77.7314,
                "matched_fragments": 261,
                "total_fragments": 872,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Demequinaceae;g__Demequina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Cellulomonadaceae",
        "g__Actinotalea",
        "s__Actinotalea sp023418375"
    ],
    "_genome_taxon": [
        "Actinomycetia",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Cellulomonadaceae",
        "g__Actinotalea",
        "s__Actinotalea sp023418375",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Cellulomonadaceae",
        "Actinotalea",
        "Actinotalea",
        "sp023418375"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}