{
    "type": "genome",
    "identifier": "GCA_023418975.1",
    "organism": "Bacillota bacterium",
    "title": "Bacillota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023418975.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17040066",
        "wgs_master": "JAEZYQ000000000.1",
        "refseq_category": "na",
        "taxid": "1879010",
        "species_taxid": "1879010",
        "organism_name": "Bacillota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_PFB_244",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2341897v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/418/975/GCA_023418975.1_ASM2341897v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillota bacterium"
        ],
        "sample_taxid": [
            "1879010"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Fortaleza"
        ],
        "sample_host_location_id": [],
        "data_size": "0.384 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 79.17,
        "contamination": 0.93,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1345562",
        "Number of Sequences": "229",
        "Longest Sequences (bp)": "27395",
        "N50 (bp)": "6322",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "36.7",
        "Number of CDSs": "1148",
        "Average Protein Length": "278.6",
        "Coding Ratio (%)": "71.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "8",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Enterococcus cecorum",
                "strain": "strain=ATCC 43198",
                "accession": "GCA_000492155.1",
                "taxid": 44008,
                "species_taxid": 44008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.1117,
                "matched_fragments": 324,
                "total_fragments": 328,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterococcus cecorum",
                "strain": "strain=ATCC 43198",
                "accession": "GCA_000407565.1",
                "taxid": 44008,
                "species_taxid": 44008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.107,
                "matched_fragments": 324,
                "total_fragments": 328,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterococcus cecorum",
                "strain": "strain=DSM 20682",
                "accession": "GCA_000379745.1",
                "taxid": 44008,
                "species_taxid": 44008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.0955,
                "matched_fragments": 319,
                "total_fragments": 328,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterococcus cecorum",
                "strain": "strain=NCTC12421",
                "accession": "GCA_900474605.1",
                "taxid": 44008,
                "species_taxid": 44008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.0721,
                "matched_fragments": 325,
                "total_fragments": 328,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Enterococcus cecorum",
                "strain": "strain=DSM 20682",
                "accession": "GCA_001885885.1",
                "taxid": 44008,
                "species_taxid": 44008,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.0648,
                "matched_fragments": 320,
                "total_fragments": 328,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 79.17,
            "contamination": 0.93,
            "strain_heterogeneity": 50.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000407565.1",
                "gtdb_species": "s__Enterococcus_E cecorum",
                "ani": 98.107,
                "matched_fragments": 324,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.77",
                "min_intra_species_ani": "96.06",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 49,
                "status": "inconclusive"
            },
            {
                "accession": "GCA_019120335.1",
                "gtdb_species": "s__Enterococcus_E stercoripullorum",
                "ani": 95.1722,
                "matched_fragments": 304,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "inconclusive"
            },
            {
                "accession": "GCF_000406925.1",
                "gtdb_species": "s__Enterococcus_E columbae",
                "ani": 80.7289,
                "matched_fragments": 173,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_E",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.97",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_001886265.1",
                "gtdb_species": "s__Enterococcus_B thailandicus",
                "ani": 78.5703,
                "matched_fragments": 61,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.46",
                "min_intra_species_ani": "99.20",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_017315945.1",
                "gtdb_species": "s__Enterococcus_B sp017315945",
                "ani": 78.5477,
                "matched_fragments": 59,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017316125.1",
                "gtdb_species": "s__Enterococcus_B sp017316125",
                "ani": 78.5188,
                "matched_fragments": 58,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_009933335.1",
                "gtdb_species": "s__Enterococcus_F sp009933335",
                "ani": 78.4717,
                "matched_fragments": 79,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_F",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017316025.1",
                "gtdb_species": "s__Enterococcus_C sp017316025",
                "ani": 78.2542,
                "matched_fragments": 62,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002140715.1",
                "gtdb_species": "s__Enterococcus sp002140715",
                "ani": 78.2399,
                "matched_fragments": 56,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017377505.1",
                "gtdb_species": "s__Enterococcus sp017377505",
                "ani": 78.2196,
                "matched_fragments": 51,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.67",
                "min_intra_species_ani": "95.67",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_016909125.1",
                "gtdb_species": "s__Enterococcus_I lemanii",
                "ani": 78.1674,
                "matched_fragments": 64,
                "total_fragments": 328,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_I",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.21",
                "min_intra_species_ani": "98.21",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Lactobacillales",
        "f__Enterococcaceae",
        "g__Enterococcus_E",
        "s__Enterococcus_E cecorum"
    ],
    "_genome_taxon": [
        "Bacillota",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota",
        "c__Bacilli",
        "o__Lactobacillales",
        "f__Enterococcaceae",
        "g__Enterococcus_E",
        "s__Enterococcus_E cecorum",
        "Bacteria",
        "Bacillota",
        "Bacilli",
        "Lactobacillales",
        "Enterococcaceae",
        "Enterococcus",
        "E",
        "Enterococcus",
        "E",
        "cecorum"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}