{
    "type": "genome",
    "identifier": "GCA_023434945.1",
    "organism": "Bacillota bacterium",
    "title": "Bacillota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023434945.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17027509",
        "wgs_master": "JAEYSG000000000.1",
        "refseq_category": "na",
        "taxid": "1879010",
        "species_taxid": "1879010",
        "organism_name": "Bacillota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_CBB_88",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2343494v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/434/945/GCA_023434945.1_ASM2343494v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillota bacterium"
        ],
        "sample_taxid": [
            "1879010"
        ],
        "sample_host_organism": [
            "Bos taurus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Belem"
        ],
        "sample_host_location_id": [],
        "data_size": "1.628 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 72.6,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5728969",
        "Number of Sequences": "137",
        "Longest Sequences (bp)": "230375",
        "N50 (bp)": "76673",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.7",
        "Number of CDSs": "4826",
        "Average Protein Length": "329.6",
        "Coding Ratio (%)": "83.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Ruminiclostridium cellobioparum",
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                "accession": "GCA_000621505.1",
                "taxid": 29355,
                "species_taxid": 29355,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 750,
                "total_fragments": 1839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ruminiclostridium cellobioparum subsp. termitidis",
                "strain": "strain=CT1112",
                "accession": "GCA_000350485.1",
                "taxid": 29371,
                "species_taxid": 29355,
                "relation_to_type": "type",
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                "ani": 80.9329,
                "matched_fragments": 737,
                "total_fragments": 1839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ruminiclostridium hungatei",
                "strain": "strain=DSM 14427",
                "accession": "GCA_002051585.1",
                "taxid": 48256,
                "species_taxid": 48256,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.0252,
                "matched_fragments": 417,
                "total_fragments": 1839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ruminiclostridium cellulolyticum",
                "strain": "strain=H10; ATCC 35319",
                "accession": "GCA_000022065.1",
                "taxid": 1521,
                "species_taxid": 1521,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0328,
                "matched_fragments": 207,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ruminiclostridium josui",
                "strain": "strain=JCM 17888",
                "accession": "GCA_000526495.1",
                "taxid": 1499,
                "species_taxid": 1499,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.402,
                "matched_fragments": 194,
                "total_fragments": 1839,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ruminiclostridium josui",
                "strain": "strain=JCM 17888",
                "accession": "GCA_001311015.1",
                "taxid": 1499,
                "species_taxid": 1499,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3522,
                "matched_fragments": 193,
                "total_fragments": 1839,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000621505.1",
                "gtdb_species": "s__Ruminiclostridium cellobioparum",
                "ani": 81.2688,
                "matched_fragments": 749,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 96.6072,
                "mean_intra_species_ani": "98.83",
                "min_intra_species_ani": "98.83",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_000350485.1",
                "gtdb_species": "s__Ruminiclostridium termitidis",
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                "matched_fragments": 736,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 96.6072,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002051585.1",
                "gtdb_species": "s__Ruminiclostridium hungatei",
                "ani": 79.0143,
                "matched_fragments": 417,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000244875.1",
                "gtdb_species": "s__Ruminiclostridium sp000244875",
                "ani": 77.7702,
                "matched_fragments": 236,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000421965.1",
                "gtdb_species": "s__Ruminiclostridium papyrosolvens_A",
                "ani": 77.7202,
                "matched_fragments": 219,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000526495.1",
                "gtdb_species": "s__Ruminiclostridium josui",
                "ani": 77.4004,
                "matched_fragments": 196,
                "total_fragments": 1839,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Acetivibrionales;f__DSM-27016;g__Ruminiclostridium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.95",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Acetivibrionales",
        "f__DSM-27016",
        "g__Ruminiclostridium",
        "s__Ruminiclostridium sp023409265"
    ],
    "_genome_taxon": [
        "Bacillota",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Acetivibrionales",
        "f__DSM-27016",
        "g__Ruminiclostridium",
        "s__Ruminiclostridium sp023409265",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Acetivibrionales",
        "DSM-27016",
        "Ruminiclostridium",
        "Ruminiclostridium",
        "sp023409265"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}