{
    "type": "genome",
    "identifier": "GCA_023437545.1",
    "organism": "Pseudomonadota bacterium",
    "title": "Pseudomonadota bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023437545.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17032896",
        "wgs_master": "JAEZFV000000000.1",
        "refseq_category": "na",
        "taxid": "1977087",
        "species_taxid": "1977087",
        "organism_name": "Pseudomonadota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_CBrB_62",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2343754v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/437/545/GCA_023437545.1_ASM2343754v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudomonadota bacterium"
        ],
        "sample_taxid": [
            "1977087"
        ],
        "sample_host_organism": [
            "Bos taurus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Braganca"
        ],
        "sample_host_location_id": [],
        "data_size": "0.579 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 38.43,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2075205",
        "Number of Sequences": "435",
        "Longest Sequences (bp)": "18144",
        "N50 (bp)": "4992",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.8",
        "Number of CDSs": "1775",
        "Average Protein Length": "276.3",
        "Coding Ratio (%)": "70.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "20",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bradyrhizobium agreste",
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                "accession": "GCA_016031625.1",
                "taxid": 2751811,
                "species_taxid": 2751811,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium betae",
                "strain": "strain=CECT 5829",
                "accession": "GCA_024806875.1",
                "taxid": 244734,
                "species_taxid": 244734,
                "relation_to_type": "type",
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium cajani",
                "strain": "strain=1010",
                "accession": "GCA_009759665.1",
                "taxid": 1928661,
                "species_taxid": 1928661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5318,
                "matched_fragments": 62,
                "total_fragments": 472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kaistia adipata",
                "strain": "strain=DSM 17808",
                "accession": "GCA_000423225.1",
                "taxid": 166954,
                "species_taxid": 166954,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.482,
                "matched_fragments": 50,
                "total_fragments": 472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Marinicauda salina",
                "strain": "strain=WD6-1",
                "accession": "GCA_003122085.1",
                "taxid": 2135793,
                "species_taxid": 2135793,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4502,
                "matched_fragments": 54,
                "total_fragments": 472,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium viridifuturi",
                "strain": "strain=SEMIA 690",
                "accession": "GCA_001238275.1",
                "taxid": 1654716,
                "species_taxid": 1654716,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3946,
                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_900696695.1",
                "gtdb_species": "s__Terricaulis sp900696695",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis",
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                "num_clustered_genomes": 2,
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            },
            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_003242075.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002083515.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_001464425.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_016791385.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__TH1-2;g__Terricaulis",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_009792355.1",
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_018241475.1",
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            },
            {
                "accession": "GCA_016195245.1",
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Caulobacterales",
        "f__TH1-2",
        "g__Vitreimonas",
        "s__"
    ],
    "_genome_taxon": [
        "Pseudomonadota",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Caulobacterales",
        "f__TH1-2",
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        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Caulobacterales",
        "TH1-2",
        "Vitreimonas",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}