{
    "type": "genome",
    "identifier": "GCA_023445145.1",
    "organism": "Synergistota bacterium",
    "title": "Synergistota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "LNCC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023445145.1",
        "bioproject": "PRJNA682348",
        "biosample": "SAMN17045157",
        "wgs_master": "JAEXLL000000000.1",
        "refseq_category": "na",
        "taxid": "2268202",
        "species_taxid": "2268202",
        "organism_name": "Synergistota bacterium",
        "infraspecific_name": "",
        "isolate": "OH_HBlB_271",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/05/17",
        "asm_name": "ASM2344514v1",
        "submitter": "LNCC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/445/145/GCA_023445145.1_ASM2344514v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-05-17",
    "dateModified": "2022-05-17",
    "datePublished": "2022-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Synergistota bacterium"
        ],
        "sample_taxid": [
            "2268202"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Blumenau"
        ],
        "sample_host_location_id": [],
        "data_size": "0.935 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 78.47,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3276146",
        "Number of Sequences": "97",
        "Longest Sequences (bp)": "174800",
        "N50 (bp)": "49273",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.5",
        "Number of CDSs": "2886",
        "Average Protein Length": "324.8",
        "Coding Ratio (%)": "85.8",
        "Number of rRNAs": "6",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "5"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Cloacibacillus porcorum",
                "strain": "strain=CL-84",
                "accession": "GCA_001701045.1",
                "taxid": 1197717,
                "species_taxid": 1197717,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.1203,
                "matched_fragments": 947,
                "total_fragments": 1044,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cloacibacillus evryensis",
                "strain": "strain=DSM 19522",
                "accession": "GCA_000585335.1",
                "taxid": 508460,
                "species_taxid": 508460,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.8781,
                "matched_fragments": 691,
                "total_fragments": 1044,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Synergistes jonesii",
                "strain": "strain=78-1",
                "accession": "GCA_000712295.1",
                "taxid": 2754,
                "species_taxid": 2754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2161,
                "matched_fragments": 287,
                "total_fragments": 1044,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Synergistes jonesii",
                "strain": "strain=78-1",
                "accession": "GCA_001757465.1",
                "taxid": 2754,
                "species_taxid": 2754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2088,
                "matched_fragments": 281,
                "total_fragments": 1044,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Synergistes jonesii",
                "strain": "strain=ATCC 49833",
                "accession": "GCA_001757485.1",
                "taxid": 2754,
                "species_taxid": 2754,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1946,
                "matched_fragments": 283,
                "total_fragments": 1044,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 78.47,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_001701045.1",
                "gtdb_species": "s__Cloacibacillus porcorum",
                "ani": 98.1203,
                "matched_fragments": 947,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.00",
                "min_intra_species_ani": "97.94",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_000585335.1",
                "gtdb_species": "s__Cloacibacillus evryensis",
                "ani": 83.861,
                "matched_fragments": 693,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.47",
                "min_intra_species_ani": "98.41",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_900544635.1",
                "gtdb_species": "s__Caccocola faecigallinarum",
                "ani": 78.9603,
                "matched_fragments": 248,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Caccocola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.54",
                "min_intra_species_ani": "96.25",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_018716365.1",
                "gtdb_species": "s__Caccocola faecipullorum",
                "ani": 78.643,
                "matched_fragments": 226,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Caccocola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002159945.1",
                "gtdb_species": "s__Caccocola sp002159945",
                "ani": 78.2794,
                "matched_fragments": 302,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Caccocola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000712295.1",
                "gtdb_species": "s__Synergistes jonesii",
                "ani": 78.2027,
                "matched_fragments": 288,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Synergistes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_017537925.1",
                "gtdb_species": "s__Synergistes sp017537925",
                "ani": 77.2944,
                "matched_fragments": 146,
                "total_fragments": 1044,
                "gtdb_taxonomy": "d__Bacteria;p__Synergistota;c__Synergistia;o__Synergistales;f__Synergistaceae;g__Synergistes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Synergistota",
        "c__Synergistia",
        "o__Synergistales",
        "f__Synergistaceae",
        "g__Cloacibacillus",
        "s__Cloacibacillus porcorum"
    ],
    "_genome_taxon": [
        "Synergistota",
        "bacterium",
        "d__Bacteria",
        "p__Synergistota",
        "c__Synergistia",
        "o__Synergistales",
        "f__Synergistaceae",
        "g__Cloacibacillus",
        "s__Cloacibacillus porcorum",
        "Bacteria",
        "Synergistota",
        "Synergistia",
        "Synergistales",
        "Synergistaceae",
        "Cloacibacillus",
        "Cloacibacillus",
        "porcorum"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}