{
    "type": "genome",
    "identifier": "GCA_023708085.1",
    "organism": "Alistipes onderdonkii",
    "title": "Alistipes onderdonkii",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023708085.1",
        "bioproject": "PRJDB13556",
        "biosample": "SAMD00480770",
        "wgs_master": "BRDE00000000.1",
        "refseq_category": "na",
        "taxid": "328813",
        "species_taxid": "328813",
        "organism_name": "Alistipes onderdonkii",
        "infraspecific_name": "",
        "isolate": "JMAG_GENOME_10602_20210801",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/02",
        "asm_name": "ASM2370808v1",
        "submitter": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/708/085/GCA_023708085.1_ASM2370808v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-02",
    "dateModified": "2022-06-02",
    "datePublished": "2022-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Alistipes onderdonkii"
        ],
        "sample_taxid": [
            "328813"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.864 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3063505",
        "Number of Sequences": "38",
        "Longest Sequences (bp)": "539227",
        "N50 (bp)": "180800",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.6",
        "Number of CDSs": "2551",
        "Average Protein Length": "354.1",
        "Coding Ratio (%)": "88.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            {
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            },
            {
                "organism_name": "Alistipes finegoldii",
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                "accession": "GCA_000265365.1",
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                "species_taxid": 214856,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes shahii",
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                "accession": "GCA_025145845.1",
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                "species_taxid": 328814,
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                "status": "below_threshold"
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            {
                "organism_name": "Alistipes shahii",
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                "ani": 84.0409,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes senegalensis",
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                "accession": "GCA_025145645.1",
                "taxid": 1288121,
                "species_taxid": 1288121,
                "relation_to_type": "type",
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                "ani": 83.1114,
                "matched_fragments": 552,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Alistipes provencensis",
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                "accession": "GCA_900083545.1",
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                "species_taxid": 1816676,
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                "accession": "GCA_900107675.1",
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                "species_taxid": 1465754,
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            },
            {
                "organism_name": "Alistipes montrealensis",
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                "accession": "GCA_018362775.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Alistipes ihumii",
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                "status": "below_threshold"
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            {
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            {
                "organism_name": "Alistipes indistinctus",
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                "status": "below_threshold"
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        ],
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            "contamination": 0.0,
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}