{
    "type": "genome",
    "identifier": "GCA_023708625.1",
    "organism": "Opitutales bacterium",
    "title": "Opitutales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023708625.1",
        "bioproject": "PRJDB13556",
        "biosample": "SAMD00473244",
        "wgs_master": "BREF00000000.1",
        "refseq_category": "na",
        "taxid": "2026772",
        "species_taxid": "2026772",
        "organism_name": "Opitutales bacterium",
        "infraspecific_name": "",
        "isolate": "JMAG_GENOME_3076_20210801",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/02",
        "asm_name": "ASM2370862v1",
        "submitter": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/708/625/GCA_023708625.1_ASM2370862v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-02",
    "dateModified": "2022-06-02",
    "datePublished": "2022-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Opitutales bacterium"
        ],
        "sample_taxid": [
            "2026772"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.710 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2509247",
        "Number of Sequences": "28",
        "Longest Sequences (bp)": "419382",
        "N50 (bp)": "147072",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.3",
        "Number of CDSs": "1999",
        "Average Protein Length": "356.6",
        "Coding Ratio (%)": "85.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900545715.1",
                "gtdb_species": "s__Merdousia gallistercoris",
                "ani": 98.6796,
                "matched_fragments": 734,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.74",
                "min_intra_species_ani": "98.74",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900545705.1",
                "gtdb_species": "s__Merdousia sp900545705",
                "ani": 92.864,
                "matched_fragments": 686,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.53",
                "min_intra_species_ani": "98.52",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_904424815.1",
                "gtdb_species": "s__Merdousia sp001917305",
                "ani": 79.4111,
                "matched_fragments": 359,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.91",
                "min_intra_species_ani": "98.75",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900760665.1",
                "gtdb_species": "s__Merdousia sp900760665",
                "ani": 78.6454,
                "matched_fragments": 312,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.95",
                "min_intra_species_ani": "97.87",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002437405.1",
                "gtdb_species": "s__Merdousia sp002437405",
                "ani": 78.523,
                "matched_fragments": 203,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.41",
                "min_intra_species_ani": "95.60",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_905214995.1",
                "gtdb_species": "s__Merdousia sp905214995",
                "ani": 78.4838,
                "matched_fragments": 290,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900760055.1",
                "gtdb_species": "s__Merdousia sp900760055",
                "ani": 76.5729,
                "matched_fragments": 114,
                "total_fragments": 822,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__CAG-312;g__Merdousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.248,
        "cell_length": -0.398,
        "doubling_h": null,
        "growth_tmp": 36.5,
        "optimum_tmp": null,
        "optimum_ph": 7.75,
        "genome_size": 5272321.702,
        "gc_content": 65.092,
        "coding_genes": 4656.944,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 51.333,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.5,
        "anaerobic_respiration": 0.25,
        "aerobic_respiration": 0.25,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Opitutales",
        "f__CAG-312",
        "g__Merdousia",
        "s__Merdousia gallistercoris"
    ],
    "_genome_taxon": [
        "Opitutales",
        "bacterium",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Opitutales",
        "f__CAG-312",
        "g__Merdousia",
        "s__Merdousia gallistercoris",
        "Bacteria",
        "Verrucomicrobiota",
        "Verrucomicrobiae",
        "Opitutales",
        "CAG-312",
        "Merdousia",
        "Merdousia",
        "gallistercoris"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}