{
    "type": "genome",
    "identifier": "GCA_023708705.1",
    "organism": "Bacillota bacterium",
    "title": "Bacillota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_023708705.1",
        "bioproject": "PRJDB13556",
        "biosample": "SAMD00474192",
        "wgs_master": "BREJ00000000.1",
        "refseq_category": "na",
        "taxid": "1879010",
        "species_taxid": "1879010",
        "organism_name": "Bacillota bacterium",
        "infraspecific_name": "",
        "isolate": "JMAG_GENOME_4024_20210801",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/06/02",
        "asm_name": "ASM2370870v1",
        "submitter": "Department of Statistical Genetics, Osaka University Graduate School of Medicine",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/708/705/GCA_023708705.1_ASM2370870v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-06-02",
    "dateModified": "2022-06-02",
    "datePublished": "2022-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillota bacterium"
        ],
        "sample_taxid": [
            "1879010"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.912 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3210698",
        "Number of Sequences": "108",
        "Longest Sequences (bp)": "490130",
        "N50 (bp)": "91846",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "52.8",
        "Number of CDSs": "3035",
        "Average Protein Length": "305.1",
        "Coding Ratio (%)": "86.5",
        "Number of rRNAs": "5",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Dysosmobacter welbionis",
                "strain": "strain=J115",
                "accession": "GCA_005121165.3",
                "taxid": 2093857,
                "species_taxid": 2093857,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.6084,
                "matched_fragments": 64,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrogeniiclostridium mannosilyticum",
                "strain": "strain=ASD2818",
                "accession": "GCA_003268275.1",
                "taxid": 2764322,
                "species_taxid": 2764322,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3038,
                "matched_fragments": 55,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromassilibacillus senegalensis",
                "strain": "strain=mt9",
                "accession": "GCA_001261775.1",
                "taxid": 1673717,
                "species_taxid": 1673717,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.935,
                "matched_fragments": 77,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium jeddahense",
                "strain": "strain=JCD",
                "accession": "GCA_000577335.1",
                "taxid": 1414721,
                "species_taxid": 1414721,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6137,
                "matched_fragments": 64,
                "total_fragments": 1014,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_008681155.1",
                "gtdb_species": "s__UBA1417 sp003531055",
                "ani": 98.7126,
                "matched_fragments": 815,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.97",
                "min_intra_species_ani": "97.38",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 13,
                "status": "conclusive"
            },
            {
                "accession": "GCA_004555625.1",
                "gtdb_species": "s__UBA1417 sp004555625",
                "ani": 80.1652,
                "matched_fragments": 354,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900552925.1",
                "gtdb_species": "s__UBA1417 sp900552925",
                "ani": 80.0037,
                "matched_fragments": 237,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.06",
                "min_intra_species_ani": "97.73",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900549945.1",
                "gtdb_species": "s__UBA1417 sp900549945",
                "ani": 79.7464,
                "matched_fragments": 274,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.46",
                "min_intra_species_ani": "97.65",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017407665.1",
                "gtdb_species": "s__UBA1417 sp017407665",
                "ani": 78.9802,
                "matched_fragments": 230,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002305575.1",
                "gtdb_species": "s__UBA1417 sp002305575",
                "ani": 78.6166,
                "matched_fragments": 306,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.68",
                "min_intra_species_ani": "98.68",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017623855.1",
                "gtdb_species": "s__UBA1417 sp017623855",
                "ani": 77.9894,
                "matched_fragments": 175,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__UBA1417",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018712435.1",
                "gtdb_species": "s__Caccousia avicola",
                "ani": 77.2731,
                "matched_fragments": 81,
                "total_fragments": 1014,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__Caccousia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.29",
                "min_intra_species_ani": "98.29",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__Hominenteromicrobium",
        "s__Hominenteromicrobium mulieris"
    ],
    "_genome_taxon": [
        "Bacillota",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__Hominenteromicrobium",
        "s__Hominenteromicrobium mulieris",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Acutalibacteraceae",
        "Hominenteromicrobium",
        "Hominenteromicrobium",
        "mulieris"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}