{ "type": "genome", "identifier": "GCA_024227155.1", "organism": "Desulfobulbaceae bacterium", "title": "Desulfobulbaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Kiel University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024227155.1", "bioproject": "PRJNA503328", "biosample": "SAMN13632535", "wgs_master": "JAAELB000000000.1", "refseq_category": "na", "taxid": "2053307", "species_taxid": "2053307", "organism_name": "Desulfobulbaceae bacterium", "infraspecific_name": "", "isolate": "Bco_9", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/07/12", "asm_name": "ASM2422715v1", "submitter": "Kiel University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/227/155/GCA_024227155.1_ASM2422715v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-07-12", "dateModified": "2022-07-12", "datePublished": "2022-07-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfobulbaceae bacterium" ], "sample_taxid": [ "2053307" ], "sample_host_organism": [ "Bolivina costata" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Peru: Oxygen minimum zone" ], "sample_host_location_id": [], "data_size": "1.862 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 10.76, "strain_heterogeneity": 6.67, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "6425259", "Number of Sequences": "1170", "Longest Sequences (bp)": "105845", "N50 (bp)": "23455", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.8", "Number of CDSs": "4939", "Average Protein Length": "309.5", "Coding Ratio (%)": "71.4", "Number of rRNAs": "3", "Number of tRNAs": "50", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfosediminicola flagellatus", "strain": "strain=IMCC35005", "accession": "GCA_005116655.2", "taxid": 2569541, "species_taxid": 2569541, "relation_to_type": "type", "validated": true, "ani": 76.7264, "matched_fragments": 108, "total_fragments": 1689, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfomarina profundi", "strain": "strain=KT2", "accession": "GCA_019703855.1", "taxid": 2772557, "species_taxid": 2772557, "relation_to_type": "type", "validated": true, "ani": 76.5175, "matched_fragments": 96, "total_fragments": 1689, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulforhopalus singaporensis", 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