{
    "type": "genome",
    "identifier": "GCA_024280035.1",
    "organism": "Campylobacterales bacterium",
    "title": "Campylobacterales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Second Organization of Oceanography, State Oceanic Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024280035.1",
        "bioproject": "PRJNA771178",
        "biosample": "SAMN22253268",
        "wgs_master": "JAJRQV000000000.1",
        "refseq_category": "na",
        "taxid": "2268180",
        "species_taxid": "2268180",
        "organism_name": "Campylobacterales bacterium",
        "infraspecific_name": "",
        "isolate": "Dive100_bin10.89",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/15",
        "asm_name": "ASM2428003v1",
        "submitter": "Second Organization of Oceanography, State Oceanic Administration",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/280/035/GCA_024280035.1_ASM2428003v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-15",
    "dateModified": "2022-07-15",
    "datePublished": "2022-07-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Campylobacterales bacterium"
        ],
        "sample_taxid": [
            "2268180"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Indian Ocean: Longqi hydrothermal vent field, ultraslow-spreading Southwestern Indian Ridge"
        ],
        "sample_host_location_id": [],
        "data_size": "0.706 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.63,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2511769",
        "Number of Sequences": "107",
        "Longest Sequences (bp)": "159811",
        "N50 (bp)": "32971",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.5",
        "Number of CDSs": "2630",
        "Average Protein Length": "278.8",
        "Coding Ratio (%)": "87.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Sulfurimonas gotlandica",
                "strain": "strain=GD1",
                "accession": "GCA_000242915.2",
                "taxid": 1176482,
                "species_taxid": 1176482,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2314,
                "matched_fragments": 85,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidatus Sulfurimonas baltica",
                "strain": "strain=GD2",
                "accession": "GCA_015265455.1",
                "taxid": 2740404,
                "species_taxid": 2740404,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2178,
                "matched_fragments": 68,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas gotlandica",
                "strain": "strain=GD 1",
                "accession": "GCA_000156095.1",
                "taxid": 1176482,
                "species_taxid": 1176482,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1861,
                "matched_fragments": 84,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas sediminis",
                "strain": "strain=S2-6",
                "accession": "GCA_014905115.1",
                "taxid": 2590020,
                "species_taxid": 2590020,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1691,
                "matched_fragments": 56,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Candidatus Sulfurimonas marisnigri",
                "strain": "strain=SoZ1",
                "accession": "GCA_015265475.1",
                "taxid": 2740405,
                "species_taxid": 2740405,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1255,
                "matched_fragments": 76,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas paralvinellae",
                "strain": "strain=GO25",
                "accession": "GCA_014905135.1",
                "taxid": 317658,
                "species_taxid": 317658,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9371,
                "matched_fragments": 60,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas autotrophica",
                "strain": "strain=DSM 16294",
                "accession": "GCA_000147355.1",
                "taxid": 202747,
                "species_taxid": 202747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8448,
                "matched_fragments": 70,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas indica",
                "strain": "strain=NW8N",
                "accession": "GCA_009192995.1",
                "taxid": 2508707,
                "species_taxid": 2508707,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7058,
                "matched_fragments": 71,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas lithotrophica",
                "strain": "strain=GYSZ_1",
                "accession": "GCA_009258225.1",
                "taxid": 2590022,
                "species_taxid": 2590022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6785,
                "matched_fragments": 60,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurimonas denitrificans",
                "strain": "strain=DSM 1251",
                "accession": "GCA_000012965.1",
                "taxid": 39766,
                "species_taxid": 39766,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2662,
                "matched_fragments": 70,
                "total_fragments": 778,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 4.63,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_012963655.1",
                "gtdb_species": "s__GCA-2733885 sp012963655",
                "ani": 78.8465,
                "matched_fragments": 209,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__GCA-2733885",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002733885.1",
                "gtdb_species": "s__GCA-2733885 sp002733885",
                "ani": 78.798,
                "matched_fragments": 317,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__GCA-2733885",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014859655.1",
                "gtdb_species": "s__GCA-2733885 sp014859655",
                "ani": 78.0615,
                "matched_fragments": 54,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__GCA-2733885",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002335055.1",
                "gtdb_species": "s__Sulfurimonas sp002335055",
                "ani": 77.5645,
                "matched_fragments": 72,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002733945.2",
                "gtdb_species": "s__Sulfurimonas sp002733945",
                "ani": 77.3439,
                "matched_fragments": 85,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018698455.1",
                "gtdb_species": "s__Sulfurimonas sp018698455",
                "ani": 77.2838,
                "matched_fragments": 83,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015493495.1",
                "gtdb_species": "s__S145-25 sp015493495",
                "ani": 77.2577,
                "matched_fragments": 73,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__S145-25",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014905095.1",
                "gtdb_species": "s__Sulfurimonas sp014905095",
                "ani": 77.2548,
                "matched_fragments": 71,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003978465.1",
                "gtdb_species": "s__Sulfurimonas sp003978465",
                "ani": 76.9681,
                "matched_fragments": 62,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015487435.1",
                "gtdb_species": "s__Sulfurimonas sp015487435",
                "ani": 76.6417,
                "matched_fragments": 72,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015487265.1",
                "gtdb_species": "s__Sulfurimonas sp015487265",
                "ani": 76.6393,
                "matched_fragments": 69,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011391635.1",
                "gtdb_species": "s__Sulfurimonas sp011391635",
                "ani": 76.5165,
                "matched_fragments": 62,
                "total_fragments": 778,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae;g__Sulfurimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": 0.259,
        "doubling_h": 0.335,
        "growth_tmp": 35.128,
        "optimum_tmp": 33.644,
        "optimum_ph": 6.803,
        "genome_size": 2102520.983,
        "gc_content": 35.015,
        "coding_genes": 2000.919,
        "rRNA16S_genes": 2.702,
        "tRNA_genes": 43.881,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.89,
        "range_salinity": 0.5,
        "facultative_respiration": 0.033,
        "anaerobic_respiration": 0.112,
        "aerobic_respiration": 0.853,
        "mesophilic_range_tmp": 0.968,
        "thermophilic_range_tmp": 0.031,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.368,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.017,
        "vibrio_cell_shape": 0.087,
        "spiral_cell_shape": 0.526
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurimonadaceae",
        "g__GCA-2733885",
        "s__GCA-2733885 sp024280035"
    ],
    "_genome_taxon": [
        "Campylobacterales",
        "bacterium",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurimonadaceae",
        "g__GCA-2733885",
        "s__GCA-2733885 sp024280035",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurimonadaceae",
        "GCA-2733885",
        "GCA-2733885",
        "sp024280035"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}