{
    "type": "genome",
    "identifier": "GCA_024280335.1",
    "organism": "Deltaproteobacteria bacterium",
    "title": "Deltaproteobacteria bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Second Organization of Oceanography, State Oceanic Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024280335.1",
        "bioproject": "PRJNA771178",
        "biosample": "SAMN22253315",
        "wgs_master": "JAJRQI000000000.1",
        "refseq_category": "na",
        "taxid": "2026735",
        "species_taxid": "2026735",
        "organism_name": "Deltaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "Dive100_bin10.46",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/15",
        "asm_name": "ASM2428033v1",
        "submitter": "Second Organization of Oceanography, State Oceanic Administration",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/280/335/GCA_024280335.1_ASM2428033v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-15",
    "dateModified": "2022-07-15",
    "datePublished": "2022-07-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deltaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "2026735"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Indian Ocean: Longqi hydrothermal vent field, ultraslow-spreading Southwestern Indian Ridge"
        ],
        "sample_host_location_id": [],
        "data_size": "1.021 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3585041",
        "Number of Sequences": "72",
        "Longest Sequences (bp)": "299059",
        "N50 (bp)": "71589",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "54.7",
        "Number of CDSs": "3273",
        "Average Protein Length": "323.4",
        "Coding Ratio (%)": "88.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Malonomonas rubra",
                "strain": "strain=DSM 5091",
                "accession": "GCA_900142125.1",
                "taxid": 57040,
                "species_taxid": 57040,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6612,
                "matched_fragments": 284,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geothermobacter hydrogeniphilus",
                "strain": "strain=EPR-M",
                "accession": "GCA_002093115.1",
                "taxid": 1969733,
                "species_taxid": 1969733,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5339,
                "matched_fragments": 218,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geopsychrobacter electrodiphilus",
                "strain": "strain=DSM 16401",
                "accession": "GCA_000384395.1",
                "taxid": 225196,
                "species_taxid": 225196,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4875,
                "matched_fragments": 184,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geothermobacter ehrlichii",
                "strain": "strain=SS015",
                "accession": "GCA_008124615.1",
                "taxid": 213224,
                "species_taxid": 213224,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1275,
                "matched_fragments": 170,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromonas versatilis",
                "strain": "strain=NIT-T3",
                "accession": "GCA_019704135.1",
                "taxid": 2802975,
                "species_taxid": 2802975,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.993,
                "matched_fragments": 162,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pelobacter seleniigenes",
                "strain": "strain=DSM 18267",
                "accession": "GCA_000711225.1",
                "taxid": 407188,
                "species_taxid": 407188,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9398,
                "matched_fragments": 180,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromonas soudanensis",
                "strain": "strain=WTL",
                "accession": "GCA_001278055.1",
                "taxid": 1603606,
                "species_taxid": 1603606,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5641,
                "matched_fragments": 125,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromusa kysingii",
                "strain": "strain=DSM 7343",
                "accession": "GCA_900107645.1",
                "taxid": 37625,
                "species_taxid": 37625,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4817,
                "matched_fragments": 82,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromonas acetexigens",
                "strain": "",
                "accession": "GCA_900111775.1",
                "taxid": 38815,
                "species_taxid": 38815,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4346,
                "matched_fragments": 120,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromonas acetexigens",
                "strain": "strain=2873",
                "accession": "GCA_007051125.1",
                "taxid": 38815,
                "species_taxid": 38815,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4345,
                "matched_fragments": 120,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geoalkalibacter subterraneus",
                "strain": "strain=Red1",
                "accession": "GCA_000827125.1",
                "taxid": 483547,
                "species_taxid": 483547,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2433,
                "matched_fragments": 68,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Syntrophotalea acetylenivorans",
                "strain": "strain=SFB93",
                "accession": "GCA_001887775.1",
                "taxid": 1842532,
                "species_taxid": 1842532,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.158,
                "matched_fragments": 62,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geoalkalibacter halelectricus",
                "strain": "strain=SAP-1",
                "accession": "GCA_025263685.1",
                "taxid": 2847045,
                "species_taxid": 2847045,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1454,
                "matched_fragments": 97,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfuromonas thiophila",
                "strain": "strain=DSM 8987",
                "accession": "GCA_900101955.1",
                "taxid": 57664,
                "species_taxid": 57664,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1378,
                "matched_fragments": 76,
                "total_fragments": 1160,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013152145.1",
                "gtdb_species": "s__Malonomonas sp013152145",
                "ani": 78.4246,
                "matched_fragments": 344,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Malonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015222355.1",
                "gtdb_species": "s__Malonomonas sp015222355",
                "ani": 78.1351,
                "matched_fragments": 134,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Malonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013138655.1",
                "gtdb_species": "s__Malonomonas sp013138655",
                "ani": 77.8757,
                "matched_fragments": 205,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Malonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003247215.1",
                "gtdb_species": "s__Malonomonas rubra_A",
                "ani": 77.7712,
                "matched_fragments": 242,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Malonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900142125.1",
                "gtdb_species": "s__Malonomonas rubra",
                "ani": 77.6612,
                "matched_fragments": 284,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Malonomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002868865.1",
                "gtdb_species": "s__BM509 sp002868865",
                "ani": 77.5916,
                "matched_fragments": 147,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__BM509",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002093115.1",
                "gtdb_species": "s__PPFX01 sp002093115",
                "ani": 77.5202,
                "matched_fragments": 219,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geothermobacteraceae;g__PPFX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002869695.1",
                "gtdb_species": "s__BM509 sp002869695",
                "ani": 77.2755,
                "matched_fragments": 165,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__BM509",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001611275.1",
                "gtdb_species": "s__DDH964 sp001611275",
                "ani": 77.006,
                "matched_fragments": 138,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__DDH964;g__DDH964",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000711225.1",
                "gtdb_species": "s__Seleniibacterium seleniigenes",
                "ani": 76.9396,
                "matched_fragments": 180,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__Seleniibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002868905.1",
                "gtdb_species": "s__BM304 sp002868905",
                "ani": 76.7786,
                "matched_fragments": 88,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geothermobacteraceae;g__BM304",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016931615.1",
                "gtdb_species": "s__BM522 sp016931615",
                "ani": 76.5766,
                "matched_fragments": 117,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geopsychrobacteraceae;g__BM522",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003695205.1",
                "gtdb_species": "s__Geothermobacter sp003695205",
                "ani": 76.5672,
                "matched_fragments": 62,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geothermobacteraceae;g__Geothermobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003246035.1",
                "gtdb_species": "s__SZUA-401 sp003246035",
                "ani": 76.4435,
                "matched_fragments": 53,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__SZUA-401;g__SZUA-401",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900111775.1",
                "gtdb_species": "s__Trichloromonas acetexigens",
                "ani": 76.4346,
                "matched_fragments": 120,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Trichloromonadaceae;g__Trichloromonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002841765.1",
                "gtdb_species": "s__UBA2197 sp002841765",
                "ani": 76.2411,
                "matched_fragments": 61,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__UBA2197;g__UBA2197",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001887775.1",
                "gtdb_species": "s__Syntrophotalea_A acetylenivorans",
                "ani": 76.1783,
                "matched_fragments": 61,
                "total_fragments": 1160,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Desulfuromonadales;f__Syntrophotaleaceae;g__Syntrophotalea_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfuromonadia",
        "o__Desulfuromonadales",
        "f__Geopsychrobacteraceae",
        "g__Malonomonas",
        "s__Malonomonas sp024280335"
    ],
    "_genome_taxon": [
        "Deltaproteobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfuromonadia",
        "o__Desulfuromonadales",
        "f__Geopsychrobacteraceae",
        "g__Malonomonas",
        "s__Malonomonas sp024280335",
        "Bacteria",
        "Desulfobacterota",
        "Desulfuromonadia",
        "Desulfuromonadales",
        "Geopsychrobacteraceae",
        "Malonomonas",
        "Malonomonas",
        "sp024280335"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}