{ "type": "genome", "identifier": "GCA_024281035.1", "organism": "Paraburkholderia sp.", "title": "Paraburkholderia sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Center for Nuclear Energy in Agriculture - University of Sao Paulo", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024281035.1", "bioproject": "PRJNA842732", "biosample": "SAMN28861730", "wgs_master": "JAMXLH000000000.1", "refseq_category": "na", "taxid": "1926495", "species_taxid": "1926495", "organism_name": "Paraburkholderia sp.", "infraspecific_name": "", "isolate": "Bin.013_Forest", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/07/15", "asm_name": "ASM2428103v1", "submitter": "Center for Nuclear Energy in Agriculture - University of Sao Paulo", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/281/035/GCA_024281035.1_ASM2428103v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-07-15", "dateModified": "2022-07-15", "datePublished": "2022-07-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Paraburkholderia sp." ], "sample_taxid": [ "1926495" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Brazil: Eastern Amazon" ], "sample_host_location_id": [], "data_size": "1.554 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.46, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total 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"below_threshold" }, { "organism_name": "Paraburkholderia pallida", "strain": "strain=7MH5", "accession": "GCA_004524855.1", "taxid": 2547399, "species_taxid": 2547399, "relation_to_type": "type", "validated": true, "ani": 84.3541, "matched_fragments": 1163, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia heleia", "strain": "strain=NBRC 101817", "accession": "GCA_000739775.1", "taxid": 634127, "species_taxid": 634127, "relation_to_type": "type", "validated": true, "ani": 84.3197, "matched_fragments": 1123, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia acidiphila", "strain": "strain=7Q-K02", "accession": "GCA_009789655.1", "taxid": 2571747, "species_taxid": 2571747, "relation_to_type": "type", "validated": true, "ani": 84.3069, "matched_fragments": 1159, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia silviterrae", "strain": "strain=4M-K11", "accession": "GCA_004353915.1", "taxid": 2528715, "species_taxid": 2528715, "relation_to_type": "type", "validated": true, "ani": 84.2819, "matched_fragments": 1154, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia nodosa", "strain": "strain=DSM 21604", "accession": "GCA_000519185.1", "taxid": 392320, "species_taxid": 392320, "relation_to_type": "type", "validated": true, "ani": 84.2751, "matched_fragments": 1182, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia oxyphila", "strain": "strain=NBRC 105797", "accession": "GCA_000685075.1", "taxid": 614212, "species_taxid": 614212, "relation_to_type": "type", "validated": true, "ani": 84.2646, "matched_fragments": 1148, "total_fragments": 1821, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia mimosarum", "strain": 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