{
    "type": "genome",
    "identifier": "GCA_024348175.1",
    "organism": "Bombella sp.",
    "title": "Bombella sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Vanderbilt University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024348175.1",
        "bioproject": "PRJNA815363",
        "biosample": "SAMN29095083",
        "wgs_master": "JAMWFD000000000.1",
        "refseq_category": "na",
        "taxid": "2020877",
        "species_taxid": "2020877",
        "organism_name": "Bombella sp.",
        "infraspecific_name": "",
        "isolate": "DMIN-2",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/20",
        "asm_name": "ASM2434817v1",
        "submitter": "Vanderbilt University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/348/175/GCA_024348175.1_ASM2434817v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-20",
    "dateModified": "2022-07-20",
    "datePublished": "2022-07-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bombella sp."
        ],
        "sample_taxid": [
            "2020877"
        ],
        "sample_host_organism": [
            "Apis mellifera"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Bloomington, IN"
        ],
        "sample_host_location_id": [],
        "data_size": "0.576 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2057252",
        "Number of Sequences": "21",
        "Longest Sequences (bp)": "368140",
        "N50 (bp)": "235189",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "59.2",
        "Number of CDSs": "1847",
        "Average Protein Length": "332.4",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bombella apis",
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                "relation_to_type": "type",
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                "total_fragments": 678,
                "ani_threshold": 95,
                "status": "conclusive"
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            {
                "organism_name": "Bombella apis",
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                "status": "conclusive"
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            {
                "organism_name": "Bombella favorum",
                "strain": "strain=TMW 2.1880",
                "accession": "GCA_014048475.1",
                "taxid": 2039164,
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                "ani": 83.5249,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bombella intestini",
                "strain": "strain=R-52487",
                "accession": "GCA_002003665.1",
                "taxid": 1539051,
                "species_taxid": 1539051,
                "relation_to_type": "type",
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                "matched_fragments": 534,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gluconobacter vitians",
                "strain": "strain=LMG 31484",
                "accession": "GCA_015244565.1",
                "taxid": 2728102,
                "species_taxid": 2728102,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 132,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gluconobacter japonicus",
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                "accession": "GCA_002723975.1",
                "taxid": 376620,
                "species_taxid": 376620,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 103,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidomonas methanolica",
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                "accession": "GCA_007988925.1",
                "taxid": 437,
                "species_taxid": 437,
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                "validated": true,
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                "matched_fragments": 87,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oecophyllibacter saccharovorans",
                "strain": "strain=Ha5",
                "accession": "GCA_006542375.1",
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                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Acetobacter garciniae",
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                "accession": "GCA_017377735.1",
                "taxid": 2817435,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Endobacter medicaginis",
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                "accession": "GCA_014192375.1",
                "taxid": 1181271,
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                "ani": 76.2707,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus microcysteis",
                "strain": "strain=NIBR12",
                "accession": "GCA_014764365.1",
                "taxid": 2771361,
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 53,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_018221685.1",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella",
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                "mean_intra_species_ani": "N/A",
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            },
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Bombella",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "growth_tmp": 28.0,
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        "bacillus_cell_shape": null,
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "Bombella",
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    ],
    "_meo": [
        {
            "id": "MEO_0000058",
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}