{
    "type": "genome",
    "identifier": "GCA_024403035.1",
    "organism": "Mogibacterium sp.",
    "title": "Mogibacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "INRA",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024403035.1",
        "bioproject": "PRJNA438436",
        "biosample": "SAMN24148219",
        "wgs_master": "JAKSSP000000000.1",
        "refseq_category": "na",
        "taxid": "2049035",
        "species_taxid": "2049035",
        "organism_name": "Mogibacterium sp.",
        "infraspecific_name": "",
        "isolate": "Horse_feces284",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/07/25",
        "asm_name": "ASM2440303v1",
        "submitter": "INRA",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/403/035/GCA_024403035.1_ASM2440303v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-07-25",
    "dateModified": "2022-07-25",
    "datePublished": "2022-07-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Mogibacterium sp."
        ],
        "sample_taxid": [
            "2049035"
        ],
        "sample_host_organism": [
            "Equus caballus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Fontainebleau"
        ],
        "sample_host_location_id": [],
        "data_size": "0.419 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 69.27,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1463359",
        "Number of Sequences": "57",
        "Longest Sequences (bp)": "236681",
        "N50 (bp)": "138199",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.3",
        "Number of CDSs": "1355",
        "Average Protein Length": "324.2",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 69.27,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_017404265.1",
                "gtdb_species": "s__RUG099 sp017404265",
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                "matched_fragments": 374,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.44",
                "min_intra_species_ani": "95.44",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902776285.1",
                "gtdb_species": "s__RUG099 sp902776285",
                "ani": 83.9166,
                "matched_fragments": 328,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.21",
                "min_intra_species_ani": "97.21",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_015058065.1",
                "gtdb_species": "s__RUG099 sp015058065",
                "ani": 81.5053,
                "matched_fragments": 217,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017505405.1",
                "gtdb_species": "s__RUG099 sp017505405",
                "ani": 80.8091,
                "matched_fragments": 235,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.82",
                "min_intra_species_ani": "97.82",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017432075.1",
                "gtdb_species": "s__RUG099 sp017432075",
                "ani": 80.631,
                "matched_fragments": 225,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017405845.1",
                "gtdb_species": "s__RUG099 sp017405845",
                "ani": 80.5845,
                "matched_fragments": 260,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902778585.1",
                "gtdb_species": "s__RUG099 sp902778585",
                "ani": 80.5236,
                "matched_fragments": 224,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.35",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900320285.1",
                "gtdb_species": "s__RUG099 sp900320285",
                "ani": 80.3785,
                "matched_fragments": 218,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.18",
                "min_intra_species_ani": "95.96",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_902775345.1",
                "gtdb_species": "s__RUG099 sp902775345",
                "ani": 80.3476,
                "matched_fragments": 258,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902790885.1",
                "gtdb_species": "s__RUG099 sp902790885",
                "ani": 80.0267,
                "matched_fragments": 185,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017469325.1",
                "gtdb_species": "s__RUG099 sp017469325",
                "ani": 79.8582,
                "matched_fragments": 125,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902795265.1",
                "gtdb_species": "s__RUG099 sp902795265",
                "ani": 79.6087,
                "matched_fragments": 213,
                "total_fragments": 459,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Anaerovoracaceae;g__RUG099",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.579,
        "cell_length": 0.111,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": 1811020.0,
        "gc_content": 41.0,
        "coding_genes": 1646.0,
        "rRNA16S_genes": null,
        "tRNA_genes": 43.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Anaerovoracaceae",
        "g__RUG099",
        "s__RUG099 sp024403035"
    ],
    "_genome_taxon": [
        "Mogibacterium",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Anaerovoracaceae",
        "g__RUG099",
        "s__RUG099 sp024403035",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Peptostreptococcales",
        "Anaerovoracaceae",
        "RUG099",
        "RUG099",
        "sp024403035"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}