{
    "type": "genome",
    "identifier": "GCA_024508975.1",
    "organism": "Agrobacterium sp.",
    "title": "Agrobacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Sao Paulo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024508975.1",
        "bioproject": "PRJNA849167",
        "biosample": "SAMN29921386",
        "wgs_master": "JANINY000000000.1",
        "refseq_category": "na",
        "taxid": "361",
        "species_taxid": "361",
        "organism_name": "Agrobacterium sp.",
        "infraspecific_name": "",
        "isolate": "Bin.012_Pasture",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/08/03",
        "asm_name": "ASM2450897v1",
        "submitter": "University of Sao Paulo",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/508/975/GCA_024508975.1_ASM2450897v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-08-03",
    "dateModified": "2022-08-03",
    "datePublished": "2022-08-03",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Agrobacterium sp."
        ],
        "sample_taxid": [
            "361"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Eastern Amazon"
        ],
        "sample_host_location_id": [],
        "data_size": "1.512 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 81.54,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5283780",
        "Number of Sequences": "388",
        "Longest Sequences (bp)": "101752",
        "N50 (bp)": "23271",
        "Gap Ratio (%)": "0.312390",
        "GCcontent (%)": "58.2",
        "Number of CDSs": "5163",
        "Average Protein Length": "264.5",
        "Coding Ratio (%)": "77.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "accession": "GCA_002008275.1",
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                "species_taxid": 648995,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Rhizobium pusense",
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                "accession": "GCA_900102105.1",
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                "species_taxid": 648995,
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                "validated": true,
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                "matched_fragments": 1032,
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Agrobacterium leguminum",
                "strain": "strain=MOPV5",
                "accession": "GCA_015704895.1",
                "taxid": 2792015,
                "species_taxid": 2792015,
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                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agrobacterium tumefaciens",
                "strain": "strain=ICMP 5856T",
                "accession": "GCA_009498475.1",
                "taxid": 358,
                "species_taxid": 358,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 87.9394,
                "matched_fragments": 958,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agrobacterium tumefaciens",
                "strain": "strain=B6",
                "accession": "GCA_001541315.1",
                "taxid": 358,
                "species_taxid": 358,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 87.9182,
                "matched_fragments": 951,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agrobacterium salinitolerans",
                "strain": "strain=YIC 5082",
                "accession": "GCA_002008225.1",
                "taxid": 1183413,
                "species_taxid": 1183413,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.8418,
                "matched_fragments": 865,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Shinella sumterensis",
                "strain": "strain=MEC087",
                "accession": "GCA_004514425.2",
                "taxid": 1967501,
                "species_taxid": 1967501,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5099,
                "matched_fragments": 334,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhizobium redzepovicii",
                "strain": "strain=18T",
                "accession": "GCA_019793435.1",
                "taxid": 2867518,
                "species_taxid": 2867518,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.439,
                "matched_fragments": 388,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhizobium dioscoreae",
                "strain": "strain=S-93",
                "accession": "GCA_009176305.1",
                "taxid": 2653122,
                "species_taxid": 2653122,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3037,
                "matched_fragments": 352,
                "total_fragments": 1561,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 81.54,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_900102105.1",
                "gtdb_species": "s__Agrobacterium pusense",
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                "matched_fragments": 1031,
                "total_fragments": 1561,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.39",
                "min_intra_species_ani": "97.95",
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                "num_clustered_genomes": 79,
                "status": "conclusive"
            },
            {
                "accession": "GCF_002943835.1",
                "gtdb_species": "s__Agrobacterium deltaense",
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                "total_fragments": 1561,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.62",
                "min_intra_species_ani": "95.20",
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                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 64,
                "status": "-"
            },
            {
                "accession": "GCF_001541315.1",
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                "matched_fragments": 950,
                "total_fragments": 1561,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.87",
                "min_intra_species_ani": "95.73",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 248,
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            },
            {
                "accession": "GCF_002008225.1",
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                "matched_fragments": 865,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Agrobacterium",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_002005205.3",
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            },
            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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            {
                "accession": "GCF_000092025.1",
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            {
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        ]
    },
    "_bac2feature": {
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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    "_meo": [
        {
            "id": "MEO_0000007",
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}