{ "type": "genome", "identifier": "GCA_024635665.1", "organism": "Salinimicrobium sp.", "title": "Salinimicrobium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "McGill University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024635665.1", "bioproject": "PRJNA699472", "biosample": "SAMN18640985", "wgs_master": "JAGXIM000000000.1", "refseq_category": "na", "taxid": "1966347", "species_taxid": "1966347", "organism_name": "Salinimicrobium sp.", "infraspecific_name": "", "isolate": "LH_M86", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/11", "asm_name": "ASM2463566v1", "submitter": "McGill University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/635/665/GCA_024635665.1_ASM2463566v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-11", "dateModified": "2022-08-11", "datePublished": "2022-08-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Salinimicrobium sp." ], "sample_taxid": [ "1966347" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada:Nunavut" ], "sample_host_location_id": [], "data_size": "0.616 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 50.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2158973", "Number of Sequences": "164", "Longest Sequences (bp)": "50973", "N50 (bp)": "15861", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.3", "Number of CDSs": "1836", "Average Protein Length": "322.1", "Coding Ratio (%)": "82.2", "Number of rRNAs": "0", "Number of tRNAs": "20", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Salinimicrobium terrae", "strain": "strain=DSM 17865", "accession": "GCA_000424665.1", "taxid": 470866, "species_taxid": 470866, "relation_to_type": "type", "validated": true, "ani": 77.9003, "matched_fragments": 215, "total_fragments": 633, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinimicrobium xinjiangense", "strain": "strain=DSM 19287", "accession": "GCA_000423585.1", "taxid": 438596, "species_taxid": 438596, "relation_to_type": "type", "validated": true, "ani": 77.8285, "matched_fragments": 187, "total_fragments": 633, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinimicrobium catena", "strain": "strain=DSM 23553", "accession": "GCA_900107495.1", "taxid": 390640, 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