{
    "type": "genome",
    "identifier": "GCA_024638285.1",
    "organism": "Cryomorphaceae bacterium",
    "title": "Cryomorphaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Handley Lab, University of Auckland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024638285.1",
        "bioproject": "PRJNA668816",
        "biosample": "SAMN19290077",
        "wgs_master": "JAHEKP000000000.1",
        "refseq_category": "na",
        "taxid": "1898111",
        "species_taxid": "1898111",
        "organism_name": "Cryomorphaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Ww586",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/08/12",
        "asm_name": "ASM2463828v1",
        "submitter": "Handley Lab, University of Auckland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/638/285/GCA_024638285.1_ASM2463828v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-08-12",
    "dateModified": "2022-08-12",
    "datePublished": "2022-08-12",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cryomorphaceae bacterium"
        ],
        "sample_taxid": [
            "1898111"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "New Zealand: Waiwera River, Auckland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.495 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 96.35,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1707571",
        "Number of Sequences": "85",
        "Longest Sequences (bp)": "107164",
        "N50 (bp)": "28939",
        "Gap Ratio (%)": "0.076132",
        "GCcontent (%)": "44.4",
        "Number of CDSs": "1462",
        "Average Protein Length": "350.9",
        "Coding Ratio (%)": "90.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 96.35,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_018402665.1",
                "gtdb_species": "s__UBA10364 sp018402665",
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                "matched_fragments": 468,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.42",
                "min_intra_species_ani": "96.42",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_905478295.1",
                "gtdb_species": "s__UBA10364 sp002387615",
                "ani": 84.5776,
                "matched_fragments": 448,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.55",
                "min_intra_species_ani": "99.11",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCA_002685435.1",
                "gtdb_species": "s__UBA10364 sp002685435",
                "ani": 83.719,
                "matched_fragments": 341,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003045825.1",
                "gtdb_species": "s__UBA10364 sp003045825",
                "ani": 82.3288,
                "matched_fragments": 382,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.67",
                "min_intra_species_ani": "96.47",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 20,
                "status": "-"
            },
            {
                "accession": "GCA_002430755.1",
                "gtdb_species": "s__UBA10364 sp002430755",
                "ani": 78.3794,
                "matched_fragments": 78,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002378005.1",
                "gtdb_species": "s__UBA10364 sp002378005",
                "ani": 77.9658,
                "matched_fragments": 142,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.86",
                "min_intra_species_ani": "99.85",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_012269745.1",
                "gtdb_species": "s__UBA10364 sp012269745",
                "ani": 77.9123,
                "matched_fragments": 115,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011525035.1",
                "gtdb_species": "s__UBA10364 sp011525035",
                "ani": 77.9046,
                "matched_fragments": 123,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003545085.1",
                "gtdb_species": "s__UBA10364 sp003545085",
                "ani": 77.5328,
                "matched_fragments": 70,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018623275.1",
                "gtdb_species": "s__UBA10364 sp018623275",
                "ani": 77.395,
                "matched_fragments": 80,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003455605.1",
                "gtdb_species": "s__UBA10364 sp003455605",
                "ani": 76.9651,
                "matched_fragments": 72,
                "total_fragments": 527,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Schleiferiaceae;g__UBA10364",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.44,
        "cell_length": 0.217,
        "doubling_h": null,
        "growth_tmp": 20.0,
        "optimum_tmp": 30.5,
        "optimum_ph": 7.0,
        "genome_size": 4000057.75,
        "gc_content": 40.2,
        "coding_genes": 3467.0,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 37.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.666,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Schleiferiaceae",
        "g__UBA10364",
        "s__UBA10364 sp024638285"
    ],
    "_genome_taxon": [
        "Cryomorphaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Schleiferiaceae",
        "g__UBA10364",
        "s__UBA10364 sp024638285",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Schleiferiaceae",
        "UBA10364",
        "UBA10364",
        "sp024638285"
    ],
    "_meo": [
        {
            "id": "MEO_0000087",
            "label": "estuary"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}