{ "type": "genome", "identifier": "GCA_024641895.1", "organism": "Actinomycetales bacterium", "title": "Actinomycetales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Handley Lab, University of Auckland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024641895.1", "bioproject": "PRJNA668816", "biosample": "SAMN19289858", "wgs_master": "JAHECE000000000.1", "refseq_category": "na", "taxid": "1911520", "species_taxid": "1911520", "organism_name": "Actinomycetales bacterium", "infraspecific_name": "", "isolate": "Ww162", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/12", "asm_name": "ASM2464189v1", "submitter": "Handley Lab, University of Auckland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/641/895/GCA_024641895.1_ASM2464189v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-12", "dateModified": "2022-08-12", "datePublished": "2022-08-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomycetales bacterium" ], "sample_taxid": [ "1911520" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "New Zealand: Waiwera River, Auckland" ], "sample_host_location_id": [], "data_size": "0.707 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 73.44, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2605996", "Number of Sequences": "319", "Longest Sequences (bp)": "42813", "N50 (bp)": "10862", "Gap Ratio (%)": "0.019302", "GCcontent (%)": "71.7", "Number of CDSs": "2084", "Average Protein Length": "314.1", "Coding Ratio (%)": "75.4", "Number of rRNAs": "0", "Number of tRNAs": "51", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Cellulomonas soli", "strain": "strain=DSM 24484", "accession": "GCA_013409305.1", "taxid": 931535, "species_taxid": 931535, "relation_to_type": "type", "validated": true, "ani": 78.0837, "matched_fragments": 267, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas carbonis", "strain": "strain=T26", "accession": "GCA_000767175.1", "taxid": 1386092, "species_taxid": 1386092, "relation_to_type": "type", "validated": true, "ani": 78.0633, "matched_fragments": 262, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas fimi", "strain": "strain=NCTC7547", "accession": "GCA_900637695.1", "taxid": 1708, "species_taxid": 1708, "relation_to_type": "type", "validated": true, "ani": 78.0191, "matched_fragments": 283, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia faecalis", "strain": "strain=ZLJ0423", "accession": "GCA_003710105.1", "taxid": 2483799, "species_taxid": 2483799, "relation_to_type": "type", "validated": true, "ani": 77.9867, "matched_fragments": 271, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas avistercoris", "strain": "strain=Sa3CUA2", "accession": "GCA_014836445.1", "taxid": 2762242, "species_taxid": 2762242, "relation_to_type": "type", "validated": true, "ani": 77.9658, "matched_fragments": 266, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas fimi", "strain": "strain=ATCC 484", "accession": "GCA_000212695.1", "taxid": 1708, "species_taxid": 1708, "relation_to_type": "type", "validated": true, "ani": 77.9559, "matched_fragments": 291, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinotalea solisilvae", "strain": "strain=KACC 19191", "accession": "GCA_016464425.1", "taxid": 2072922, "species_taxid": 2072922, "relation_to_type": "type", "validated": true, "ani": 77.9519, "matched_fragments": 292, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas palmilytica", "strain": "strain=EW123", "accession": "GCA_021590045.1", "taxid": 2608402, "species_taxid": 2608402, "relation_to_type": "type", "validated": true, "ani": 77.9277, "matched_fragments": 283, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia soli", "strain": "strain=DSM 21838", "accession": "GCA_002563695.1", "taxid": 638953, "species_taxid": 638953, "relation_to_type": "type", "validated": true, "ani": 77.9266, "matched_fragments": 241, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia ruanii", "strain": "strain=JCM 15130", "accession": "GCA_009193175.1", "taxid": 348442, "species_taxid": 348442, "relation_to_type": "type", "validated": true, "ani": 77.8997, "matched_fragments": 273, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas terrae", "strain": "strain=NBRC 100819", "accession": "GCA_007990265.1", "taxid": 311234, "species_taxid": 311234, "relation_to_type": "type", "validated": true, "ani": 77.8596, "matched_fragments": 278, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas fulva", "strain": "strain=DKR-3", "accession": "GCA_018531375.1", "taxid": 2835530, "species_taxid": 2835530, "relation_to_type": "type", "validated": true, "ani": 77.8465, "matched_fragments": 256, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas hominis", "strain": "strain=DSM 9581", "accession": "GCA_014201095.1", "taxid": 156981, "species_taxid": 156981, "relation_to_type": "suspected-type", "validated": true, "ani": 77.8407, "matched_fragments": 287, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas massiliensis", "strain": "strain=JC225", "accession": "GCA_000312005.1", "taxid": 1465811, "species_taxid": 1465811, "relation_to_type": "type", "validated": true, "ani": 77.8118, "matched_fragments": 294, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanitalea stevensii", "strain": "strain=Sa1BUA1", "accession": "GCA_014837105.1", "taxid": 2763072, "species_taxid": 2763072, "relation_to_type": "type", "validated": true, "ani": 77.8025, "matched_fragments": 261, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Occultella gossypii", "strain": "strain=N2-46", "accession": "GCA_019947135.1", "taxid": 2800820, "species_taxid": 2800820, "relation_to_type": "type", "validated": true, "ani": 77.7617, "matched_fragments": 232, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas hominis", "strain": "strain=NBRC 16055", "accession": "GCA_007989225.1", "taxid": 156981, "species_taxid": 156981, "relation_to_type": "suspected-type", "validated": true, "ani": 77.7602, "matched_fragments": 286, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas persica", "strain": "strain=NBRC 101101", "accession": "GCA_007989825.1", "taxid": 76861, "species_taxid": 76861, "relation_to_type": "type", "validated": true, "ani": 77.7199, "matched_fragments": 270, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia wutianyii", "strain": "strain=Z294", "accession": "GCA_006349365.1", "taxid": 2585135, "species_taxid": 2585135, "relation_to_type": "type", "validated": true, "ani": 77.7094, "matched_fragments": 279, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas xylanilytica", "strain": "strain=NBRC 101102", "accession": "GCA_007989805.1", "taxid": 233583, "species_taxid": 233583, "relation_to_type": "type", "validated": true, "ani": 77.6876, "matched_fragments": 272, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Occultella glacieicola", "strain": "strain=T3246-1", "accession": "GCA_004353825.1", "taxid": 2518684, "species_taxid": 2518684, "relation_to_type": "type", "validated": true, "ani": 77.6568, "matched_fragments": 231, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas endophytica", "strain": "strain=SYSUP0004", "accession": "GCA_004123805.1", "taxid": 2494735, "species_taxid": 2494735, "relation_to_type": "type", "validated": true, "ani": 77.6203, "matched_fragments": 284, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Beutenbergia cavernae", "strain": "strain=DSM 12333", "accession": "GCA_000023105.1", "taxid": 84757, "species_taxid": 84757, "relation_to_type": "type", "validated": true, "ani": 77.5719, "matched_fragments": 286, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia turbata", "strain": "strain=JCM3160", "accession": "GCA_004121315.1", "taxid": 1713, "species_taxid": 1713, "relation_to_type": "type", "validated": true, "ani": 77.5395, "matched_fragments": 256, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia rustica", "strain": "strain=Sa4CUA1", "accession": "GCA_014836555.1", "taxid": 2762237, "species_taxid": 2762237, 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76.2103, "matched_fragments": 178, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fradiae", "strain": "strain=ATCC 10745", "accession": "GCA_009834665.1", "taxid": 1906, "species_taxid": 1906, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1985, "matched_fragments": 185, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces fradiae", "strain": "strain=ATCC 10745", "accession": "GCA_008704425.1", "taxid": 1906, "species_taxid": 1906, "relation_to_type": "suspected-type", "validated": true, "ani": 76.1636, "matched_fragments": 186, "total_fragments": 716, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 73.44, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014042015.1", "gtdb_species": "s__Actinotalea sp014042015", "ani": 78.1677, "matched_fragments": 286, "total_fragments": 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