{ "type": "genome", "identifier": "GCA_024643665.1", "organism": "Burkholderiaceae bacterium", "title": "Burkholderiaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Handley Lab, University of Auckland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024643665.1", "bioproject": "PRJNA668816", "biosample": "SAMN19290124", "wgs_master": "JAHEMK000000000.1", "refseq_category": "na", "taxid": "2030806", "species_taxid": "2030806", "organism_name": "Burkholderiaceae bacterium", "infraspecific_name": "", "isolate": "Ww70", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/12", "asm_name": "ASM2464366v1", "submitter": "Handley Lab, University of Auckland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/643/665/GCA_024643665.1_ASM2464366v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-12", "dateModified": "2022-08-12", "datePublished": "2022-08-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Burkholderiaceae bacterium" ], "sample_taxid": [ "2030806" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "New Zealand: Waiwera River, Auckland" ], "sample_host_location_id": [], "data_size": "0.890 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.98, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3209147", "Number of Sequences": "491", "Longest Sequences (bp)": "29079", "N50 (bp)": "7739", "Gap Ratio (%)": "0.019226", "GCcontent (%)": "67.3", "Number of CDSs": "2579", "Average Protein Length": "309.0", "Coding Ratio (%)": "74.5", "Number of rRNAs": "0", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lautropia mirabilis", "strain": "strain=ATCC 51599", "accession": "GCA_000186425.1", "taxid": 47671, "species_taxid": 47671, "relation_to_type": "type", "validated": true, "ani": 77.7128, "matched_fragments": 121, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus neocaledonicus", "strain": "strain=STM6070", "accession": "GCA_000372525.1", "taxid": 1040979, "species_taxid": 1040979, "relation_to_type": "type", "validated": true, "ani": 77.3767, "matched_fragments": 211, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pigmentiphaga kullae", "strain": "strain=K24", "accession": "GCA_004216695.1", "taxid": 151784, "species_taxid": 151784, "relation_to_type": "type", "validated": true, "ani": 77.3714, "matched_fragments": 163, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus nantongensis", "strain": "strain=X1", "accession": "GCA_001598055.1", "taxid": 1796606, "species_taxid": 1796606, "relation_to_type": "type", "validated": true, "ani": 77.2715, "matched_fragments": 216, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus alkaliphilus", "strain": "strain=ASC-732", "accession": "GCA_900094595.1", "taxid": 942866, "species_taxid": 942866, "relation_to_type": "type", "validated": true, "ani": 77.262, "matched_fragments": 220, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia agilis", "strain": "strain=JCM 31605", "accession": "GCA_024756255.1", "taxid": 1811226, "species_taxid": 1811226, "relation_to_type": "type", "validated": true, "ani": 77.1517, "matched_fragments": 179, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus cauae", "strain": "strain=MKL-01", "accession": "GCA_008632125.1", "taxid": 2608999, "species_taxid": 2608999, "relation_to_type": "type", "validated": true, "ani": 77.098, "matched_fragments": 214, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia glaciei", "strain": "strain=B448-2", "accession": "GCA_003011895.2", "taxid": 1524097, "species_taxid": 1524097, "relation_to_type": "type", "validated": true, "ani": 77.0921, "matched_fragments": 190, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum aridicola", "strain": "strain=NCCP-691", "accession": "GCA_019656455.1", "taxid": 2849687, "species_taxid": 2849687, "relation_to_type": "type", "validated": true, "ani": 77.0839, "matched_fragments": 182, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia ferrariae", "strain": "strain=NBRC 106233", "accession": "GCA_000685035.1", "taxid": 386056, "species_taxid": 386056, "relation_to_type": "type", "validated": true, "ani": 77.0545, "matched_fragments": 184, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia solisilvae", "strain": "strain=JCM 31607", "accession": "GCA_024753215.1", "taxid": 1811225, "species_taxid": 1811225, "relation_to_type": "type", "validated": true, "ani": 77.0281, "matched_fragments": 180, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas brunnea", "strain": "strain=LX20W", "accession": "GCA_014042345.1", "taxid": 2758569, "species_taxid": 2758569, "relation_to_type": "type", "validated": true, "ani": 77.0227, "matched_fragments": 149, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus gilardii", "strain": "strain=ATCC 700815", "accession": "GCA_013004615.1", "taxid": 82541, "species_taxid": 82541, "relation_to_type": "type", "validated": true, "ani": 77.0109, "matched_fragments": 215, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraburkholderia acidipaludis", "strain": "strain=NBRC 101816", "accession": "GCA_000684975.1", "taxid": 660537, "species_taxid": 660537, "relation_to_type": "type", "validated": true, "ani": 76.9826, "matched_fragments": 177, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Verticiella sediminum", "strain": "strain=DSM 27279", "accession": "GCA_007558815.1", "taxid": 1247510, "species_taxid": 1247510, "relation_to_type": "type", "validated": true, "ani": 76.918, "matched_fragments": 179, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum robiniae", "strain": "strain=HZ10", "accession": "GCA_002213415.1", "taxid": 2014887, "species_taxid": 2014887, "relation_to_type": "type", "validated": true, "ani": 76.8882, "matched_fragments": 179, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Derxia lacustris", "strain": "strain=HL-12", "accession": "GCA_002105195.1", "taxid": 764842, "species_taxid": 764842, "relation_to_type": "type", "validated": true, "ani": 76.878, "matched_fragments": 201, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquabacterium commune", "strain": "strain=DSM 11901", "accession": "GCA_004362855.1", "taxid": 70586, "species_taxid": 70586, "relation_to_type": "type", "validated": true, "ani": 76.8692, "matched_fragments": 127, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caenimonas koreensis", "strain": "strain=EMB320", "accession": "GCA_009646335.1", "taxid": 367474, "species_taxid": 367474, "relation_to_type": "type", "validated": true, "ani": 76.8327, "matched_fragments": 125, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia gladioli", "strain": "strain=ATCC 10248", "accession": "GCA_000959725.1", "taxid": 28095, "species_taxid": 28095, "relation_to_type": "type", "validated": true, "ani": 76.8268, "matched_fragments": 257, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia gladioli", "strain": "strain=NBRC 13700", "accession": "GCA_000739755.1", "taxid": 28095, "species_taxid": 28095, "relation_to_type": "type", "validated": true, "ani": 76.8, "matched_fragments": 251, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia agri", "strain": "strain=JCM 31661", "accession": "GCA_024753255.1", "taxid": 1886785, "species_taxid": 1886785, "relation_to_type": "type", "validated": true, "ani": 76.7803, "matched_fragments": 147, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoduganella namucuonensis", "strain": "strain=CGMCC 1.11014", "accession": "GCA_900116645.1", "taxid": 1035707, "species_taxid": 1035707, "relation_to_type": "type", "validated": true, "ani": 76.7772, "matched_fragments": 212, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia perseverans", "strain": "strain=INN12", "accession": "GCA_022870505.1", "taxid": 2615214, "species_taxid": 2615214, "relation_to_type": "type", "validated": true, "ani": 76.7555, "matched_fragments": 248, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia ubonensis", "strain": "strain=LMG 20358", "accession": "GCA_902833085.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 76.7515, "matched_fragments": 217, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia ubonensis", "strain": "", "accession": "GCA_902499185.1", "taxid": 101571, "species_taxid": 101571, "relation_to_type": "type", "validated": true, "ani": 76.6855, "matched_fragments": 220, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum malthae", "strain": "strain=CC-AFH3", "accession": "GCA_015352985.1", "taxid": 1260987, "species_taxid": 1260987, "relation_to_type": "type", "validated": true, "ani": 76.6741, "matched_fragments": 142, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia oklahomensis", "strain": "strain=C6786", "accession": "GCA_000170375.1", "taxid": 342113, "species_taxid": 342113, "relation_to_type": "type", "validated": true, "ani": 76.6244, "matched_fragments": 192, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus metallidurans", "strain": "strain=CH34", "accession": "GCA_000196015.1", "taxid": 119219, "species_taxid": 119219, "relation_to_type": "type", "validated": true, "ani": 76.6123, "matched_fragments": 165, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia oklahomensis", "strain": "strain=LMG 23618", "accession": "GCA_900608545.1", "taxid": 342113, "species_taxid": 342113, "relation_to_type": "type", "validated": true, "ani": 76.5789, "matched_fragments": 209, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilia mucilaginosa", "strain": "strain=CCM 8733", "accession": "GCA_011682145.1", "taxid": 2609282, "species_taxid": 2609282, "relation_to_type": "type", "validated": true, "ani": 76.4631, "matched_fragments": 148, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella flabilis", "strain": "strain=AU10664", "accession": "GCA_001676725.1", "taxid": 463014, "species_taxid": 463014, "relation_to_type": "type", "validated": true, "ani": 76.3728, "matched_fragments": 117, "total_fragments": 833, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 95.83, "contamination": 0.98, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_014202215.1", "gtdb_species": "s__Quisquiliibacterium transsilvanicum", "ani": 79.5518, "matched_fragments": 311, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Quisquiliibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001724855.1", "gtdb_species": "s__SCN-69-89 sp001724855", "ani": 79.3149, "matched_fragments": 335, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008039575.1", "gtdb_species": "s__SCN-69-89 sp008039575", "ani": 79.0776, "matched_fragments": 327, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003577305.1", "gtdb_species": "s__SCN-69-89 sp003577305", "ani": 79.0744, "matched_fragments": 314, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.77", "min_intra_species_ani": "99.54", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_001724315.1", "gtdb_species": "s__SCN-69-89 sp001724315", "ani": 79.0687, "matched_fragments": 236, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001898645.1", "gtdb_species": "s__SCN-69-89 sp001898645", "ani": 79.013, "matched_fragments": 327, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018970865.1", "gtdb_species": "s__CAIZPE01 sp018970865", "ani": 78.8941, "matched_fragments": 288, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CAIZPE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903934795.1", "gtdb_species": "s__CAIZPE01 sp903934795", "ani": 78.6517, "matched_fragments": 271, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CAIZPE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.53", "min_intra_species_ani": "99.52", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_003576795.1", "gtdb_species": "s__SCN-69-89 sp003576795", "ani": 78.6056, "matched_fragments": 234, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903934295.1", "gtdb_species": "s__CAIZPE01 sp903934295", "ani": 78.5858, "matched_fragments": 301, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CAIZPE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.93", "min_intra_species_ani": "99.93", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_012513825.1", "gtdb_species": "s__SCN-69-89 sp012513825", "ani": 78.3998, "matched_fragments": 256, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003818495.1", "gtdb_species": "s__UBA4615 sp003818495", "ani": 78.3151, "matched_fragments": 299, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA4615", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017307915.1", "gtdb_species": "s__SCN-69-89 sp017307915", "ani": 78.2331, "matched_fragments": 264, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCN-69-89", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016716275.1", "gtdb_species": "s__JADJWR01 sp016716275", "ani": 77.8587, "matched_fragments": 246, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JADJWR01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004362855.1", "gtdb_species": "s__Aquabacterium commune", "ani": 76.8692, "matched_fragments": 127, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.44", "min_intra_species_ani": "95.44", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003963115.1", "gtdb_species": "s__Aquabacterium sp003963115", "ani": 76.445, "matched_fragments": 93, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001676725.1", "gtdb_species": "s__Bordetella_C flabilis", "ani": 76.3728, "matched_fragments": 117, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903894125.1", "gtdb_species": "s__Aquabacterium sp903894125", "ani": 76.3224, "matched_fragments": 87, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.35", "min_intra_species_ani": "99.35", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903871865.1", "gtdb_species": "s__Aquabacterium sp903871865", "ani": 76.1757, "matched_fragments": 57, "total_fragments": 833, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Aquabacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.267, "cell_length": 0.119, "doubling_h": -0.007, "growth_tmp": 30.563, "optimum_tmp": 30.641, "optimum_ph": 6.554, "genome_size": 6983573.911, "gc_content": 63.546, "coding_genes": 5983.195, "rRNA16S_genes": 4.699, "tRNA_genes": 62.266, "gram_stain": 0.0, "sporulation": 0.026, "motility": 0.693, "range_salinity": 0.222, "facultative_respiration": 0.072, "anaerobic_respiration": 0.032, "aerobic_respiration": 0.895, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.967, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.021, "vibrio_cell_shape": 0.01, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__Burkholderiaceae", "g__Quisquiliibacterium", "s__" ], "_genome_taxon": [ "Burkholderiaceae", "bacterium", "d__Bacteria", "p__Pseudomonadota", "c__Gammaproteobacteria", "o__Burkholderiales", "f__Burkholderiaceae", "g__Quisquiliibacterium", "s__", "Bacteria", "Pseudomonadota", "Gammaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Quisquiliibacterium", "s", "", "" ], "_meo": [ { "id": "MEO_0000087", "label": "estuary" }, { "id": "MEO_0000066", "label": "sediment" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }