{ "type": "genome", "identifier": "GCA_024682455.1", "organism": "Ruminiclostridium sp.", "title": "Ruminiclostridium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Baqiyatallah University of Medical Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024682455.1", "bioproject": "PRJNA746430", "biosample": "SAMN20247234", "wgs_master": "JAIKZF000000000.1", "refseq_category": "na", "taxid": "2053608", "species_taxid": "2053608", "organism_name": "Ruminiclostridium sp.", "infraspecific_name": "", "isolate": "RUI500", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/15", "asm_name": "ASM2468245v1", "submitter": "Baqiyatallah University of Medical Sciences", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/682/455/GCA_024682455.1_ASM2468245v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-15", "dateModified": "2022-08-15", "datePublished": "2022-08-15", "_annotation": { "sample_count": 1, "sample_organism": [ "Ruminiclostridium sp." ], "sample_taxid": [ "2053608" ], "sample_host_organism": [ "camel" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Iran: Karaj" ], "sample_host_location_id": [], "data_size": "0.551 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1936518", "Number of Sequences": "109", "Longest Sequences (bp)": "89766", "N50 (bp)": "29059", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.8", "Number of CDSs": "1602", "Average Protein Length": "344.1", "Coding Ratio (%)": "85.4", "Number of rRNAs": "0", "Number of tRNAs": "21", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 91.67, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_016282095.1", "gtdb_species": "s__Ruminiclostridium_E sp016282095", "ani": 83.4409, "matched_fragments": 395, "total_fragments": 593, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminiclostridium_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_905235805.1", "gtdb_species": "s__Ruminiclostridium_E sp905235805", "ani": 81.0507, 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