{ "type": "genome", "identifier": "GCA_024709385.1", "organism": "Thauera sp.", "title": "Thauera sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Colledge of Environmental Sciences and Engineering, Peking University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024709385.1", "bioproject": "PRJNA848245", "biosample": "SAMN28993217", "wgs_master": "JANJWU000000000.1", "refseq_category": "na", "taxid": "1905334", "species_taxid": "1905334", "organism_name": "Thauera sp.", "infraspecific_name": "", "isolate": "RS262_metabat.bin.19", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/18", "asm_name": "ASM2470938v1", "submitter": "Colledge of Environmental Sciences and Engineering, Peking University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/709/385/GCA_024709385.1_ASM2470938v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-18", "dateModified": "2022-08-18", "datePublished": "2022-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Thauera sp." ], "sample_taxid": [ "1905334" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Beijing" ], "sample_host_location_id": [], "data_size": "0.847 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 58.33, "contamination": 8.33, "strain_heterogeneity": 33.33, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3061384", "Number of Sequences": "395", "Longest Sequences (bp)": "31461", "N50 (bp)": "10651", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "66.3", "Number of CDSs": "2449", "Average Protein Length": "316.3", "Coding Ratio (%)": "75.9", "Number of rRNAs": "0", "Number of tRNAs": "56", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thauera propionica", "strain": "strain=KNDSS-Mac4", "accession": "GCA_002245655.1", "taxid": 2019431, "species_taxid": 2019431, "relation_to_type": "type", "validated": true, "ani": 98.2028, "matched_fragments": 688, "total_fragments": 817, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Thauera humireducens", "strain": "strain=SgZ-1", "accession": "GCA_001051995.2", "taxid": 1134435, "species_taxid": 1134435, "relation_to_type": "type", "validated": true, "ani": 90.488, "matched_fragments": 666, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 83.939, "matched_fragments": 497, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=47Lol = DSM 12138", "accession": "GCA_000310205.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 83.7931, "matched_fragments": 497, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=DSM 12138", "accession": "GCA_000621305.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 83.7132, "matched_fragments": 514, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera phenylacetica", "strain": "strain=B4P", "accession": "GCA_000310225.1", "taxid": 164400, "species_taxid": 164400, "relation_to_type": "type", "validated": true, "ani": 83.6485, "matched_fragments": 483, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aminoaromatica", "strain": "strain=S2", "accession": "GCA_000310185.1", "taxid": 164330, "species_taxid": 164330, "relation_to_type": "type", "validated": true, "ani": 83.1606, "matched_fragments": 501, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum toluolicum", "strain": "strain=T", "accession": "GCA_012911005.2", "taxid": 90060, "species_taxid": 90060, "relation_to_type": "type", "validated": true, "ani": 79.7738, "matched_fragments": 392, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum anaerobium", "strain": "strain=LuFRes1", "accession": "GCA_012910705.2", "taxid": 182180, 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