{ "type": "genome", "identifier": "GCA_024711085.1", "organism": "Thermomonas sp.", "title": "Thermomonas sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Colledge of Environmental Sciences and Engineering, Peking University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_024711085.1", "bioproject": "PRJNA848245", "biosample": "SAMN28990809", "wgs_master": "JANJTO000000000.1", "refseq_category": "na", "taxid": "1971895", "species_taxid": "1971895", "organism_name": "Thermomonas sp.", "infraspecific_name": "", "isolate": "RX1_metabat.bin.90", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/08/18", "asm_name": "ASM2471108v1", "submitter": "Colledge of Environmental Sciences and Engineering, Peking University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/711/085/GCA_024711085.1_ASM2471108v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-08-18", "dateModified": "2022-08-18", "datePublished": "2022-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Thermomonas sp." ], "sample_taxid": [ "1971895" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Beijing" ], "sample_host_location_id": [], "data_size": "0.671 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 94.53, "contamination": 1.39, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2466922", "Number of Sequences": "493", "Longest Sequences (bp)": "32049", "N50 (bp)": "6996", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.0", "Number of CDSs": "1874", "Average Protein Length": "303.2", "Coding Ratio (%)": "69.1", "Number of rRNAs": "1", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thermomonas fusca", "strain": "strain=DSM 15424", "accession": "GCA_000423885.1", "taxid": 215690, "species_taxid": 215690, "relation_to_type": "type", "validated": true, "ani": 92.4204, "matched_fragments": 507, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas haemolytica", "strain": "strain=DSM 13605", "accession": "GCA_004346265.1", "taxid": 141949, "species_taxid": 141949, "relation_to_type": "type", "validated": true, "ani": 85.501, "matched_fragments": 434, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas haemolytica", "strain": "strain=LMG 19653", "accession": "GCA_006352395.1", "taxid": 141949, "species_taxid": 141949, "relation_to_type": "type", "validated": true, "ani": 85.3149, "matched_fragments": 429, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas aquatica", "strain": "strain=SY21", "accession": "GCA_006337105.1", "taxid": 2202149, "species_taxid": 2202149, "relation_to_type": "type", "validated": true, "ani": 84.4396, "matched_fragments": 420, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas carbonis", "strain": "strain=KCTC 42013", "accession": "GCA_014652775.1", "taxid": 1463158, "species_taxid": 1463158, "relation_to_type": "type", "validated": true, "ani": 82.6536, "matched_fragments": 409, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulcaniibacterium gelatinicum", "strain": "strain=R-5-52-3", "accession": "GCA_008033445.1", "taxid": 2598725, "species_taxid": 2598725, "relation_to_type": "type", "validated": true, "ani": 81.4172, "matched_fragments": 364, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas marina", "strain": "strain=FR1330", "accession": "GCA_007859325.1", "taxid": 488485, "species_taxid": 488485, "relation_to_type": "type", "validated": true, "ani": 81.3275, "matched_fragments": 382, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas hydrothermalis", "strain": "strain=DSM 14834", "accession": "GCA_900129205.1", "taxid": 213588, "species_taxid": 213588, "relation_to_type": "type", "validated": true, "ani": 81.2414, "matched_fragments": 344, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas lumbrici", "strain": "strain=1.1416", "accession": "GCA_006476065.1", "taxid": 2559601, "species_taxid": 2559601, "relation_to_type": "type", "validated": true, "ani": 81.2121, "matched_fragments": 325, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas aquatica", "strain": "strain=RIB1-20", "accession": "GCA_022662575.1", "taxid": 450364, "species_taxid": 450364, "relation_to_type": "type", "validated": true, "ani": 81.1479, "matched_fragments": 365, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas padinae", "strain": "strain=KCTC 52403", "accession": "GCA_014652935.1", "taxid": 1714359, "species_taxid": 1714359, "relation_to_type": "type", "validated": true, "ani": 81.0449, "matched_fragments": 345, "total_fragments": 568, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stenotrophomonas acidaminiphila", "strain": "strain=DSM 13117", "accession": "GCA_024221815.1", "taxid": 128780, "species_taxid": 128780, "relation_to_type": 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