{
    "type": "genome",
    "identifier": "GCA_024959875.1",
    "organism": "Dehalococcoidia bacterium",
    "title": "Dehalococcoidia bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "National Oceanic & Atmospheric Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024959875.1",
        "bioproject": "PRJNA870083",
        "biosample": "SAMN30349975",
        "wgs_master": "JANXFO000000000.1",
        "refseq_category": "na",
        "taxid": "2026734",
        "species_taxid": "2026734",
        "organism_name": "Dehalococcoidia bacterium",
        "infraspecific_name": "",
        "isolate": "Bin02_094",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/05",
        "asm_name": "ASM2495987v1",
        "submitter": "National Oceanic & Atmospheric Administration",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/959/875/GCA_024959875.1_ASM2495987v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-05",
    "dateModified": "2022-09-05",
    "datePublished": "2022-09-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Dehalococcoidia bacterium"
        ],
        "sample_taxid": [
            "2026734"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Green Canyon, Gulf of Mexico"
        ],
        "sample_host_location_id": [],
        "data_size": "1.049 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 80.0,
            "max": 80.0
        },
        "completeness": 72.92,
        "contamination": 30.41,
        "strain_heterogeneity": 15.52,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3547014",
        "Number of Sequences": "1594",
        "Longest Sequences (bp)": "11956",
        "N50 (bp)": "2164",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "46.3",
        "Number of CDSs": "1779",
        "Average Protein Length": "268.9",
        "Coding Ratio (%)": "40.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 72.92,
            "contamination": 30.41,
            "strain_heterogeneity": 15.52
        },
        "gtdb_result": [
            {
                "accession": "GCA_004124465.1",
                "gtdb_species": "s__UBA2125 sp004124465",
                "ani": 94.2932,
                "matched_fragments": 50,
                "total_fragments": 212,
                "gtdb_taxonomy": "d__Bacteria;p__Marinisomatota;c__Marinisomatia;o__Marinisomatales;f__S15-B10;g__UBA2125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002329125.1",
                "gtdb_species": "s__UBA2125 sp002329125",
                "ani": 90.7326,
                "matched_fragments": 61,
                "total_fragments": 212,
                "gtdb_taxonomy": "d__Bacteria;p__Marinisomatota;c__Marinisomatia;o__Marinisomatales;f__S15-B10;g__UBA2125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.65",
                "min_intra_species_ani": "95.42",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_012964825.1",
                "gtdb_species": "s__UBA2125 sp002311275",
                "ani": 85.8997,
                "matched_fragments": 67,
                "total_fragments": 212,
                "gtdb_taxonomy": "d__Bacteria;p__Marinisomatota;c__Marinisomatia;o__Marinisomatales;f__S15-B10;g__UBA2125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.57",
                "min_intra_species_ani": "99.39",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 10,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Marinisomatota",
        "c__Marinisomatia",
        "o__Marinisomatales",
        "f__S15-B10",
        "g__UBA2125",
        "s__"
    ],
    "_genome_taxon": [
        "Dehalococcoidia",
        "bacterium",
        "d__Bacteria",
        "p__Marinisomatota",
        "c__Marinisomatia",
        "o__Marinisomatales",
        "f__S15-B10",
        "g__UBA2125",
        "s__",
        "Bacteria",
        "Marinisomatota",
        "Marinisomatia",
        "Marinisomatales",
        "S15-B10",
        "UBA2125",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}