{
    "type": "genome",
    "identifier": "GCA_024960085.1",
    "organism": "Arenicellales bacterium",
    "title": "Arenicellales bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "National Oceanic & Atmospheric Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_024960085.1",
        "bioproject": "PRJNA870083",
        "biosample": "SAMN30350014",
        "wgs_master": "JANXHB000000000.1",
        "refseq_category": "na",
        "taxid": "2913493",
        "species_taxid": "2913493",
        "organism_name": "Arenicellales bacterium",
        "infraspecific_name": "",
        "isolate": "Bin04_026",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/05",
        "asm_name": "ASM2496008v1",
        "submitter": "National Oceanic & Atmospheric Administration",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/024/960/085/GCA_024960085.1_ASM2496008v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-05",
    "dateModified": "2022-09-05",
    "datePublished": "2022-09-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Arenicellales bacterium"
        ],
        "sample_taxid": [
            "2913493"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Green Canyon, Gulf of Mexico"
        ],
        "sample_host_location_id": [],
        "data_size": "0.842 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 80.0,
            "max": 80.0
        },
        "completeness": 83.65,
        "contamination": 45.82,
        "strain_heterogeneity": 16.22,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2889515",
        "Number of Sequences": "644",
        "Longest Sequences (bp)": "42448",
        "N50 (bp)": "4512",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.6",
        "Number of CDSs": "1971",
        "Average Protein Length": "310.9",
        "Coding Ratio (%)": "63.6",
        "Number of rRNAs": "7",
        "Number of tRNAs": "66",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 83.65,
            "contamination": 45.82,
            "strain_heterogeneity": 16.22
        },
        "gtdb_result": [
            {
                "accession": "GCA_002731295.1",
                "gtdb_species": "s__REDSEA-S09-B13 sp002731295",
                "ani": 95.34,
                "matched_fragments": 252,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Arenicellales;f__UBA868;g__REDSEA-S09-B13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_001629395.1",
                "gtdb_species": "s__REDSEA-S09-B13 sp001629395",
                "ani": 92.3891,
                "matched_fragments": 264,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Arenicellales;f__UBA868;g__REDSEA-S09-B13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.93",
                "min_intra_species_ani": "98.69",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_002507125.1",
                "gtdb_species": "s__Thalassarchaeum sp002507125",
                "ani": 91.5457,
                "matched_fragments": 158,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.54",
                "min_intra_species_ani": "98.42",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002456995.1",
                "gtdb_species": "s__REDSEA-S09-B13 sp002456995",
                "ani": 90.6404,
                "matched_fragments": 196,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Arenicellales;f__UBA868;g__REDSEA-S09-B13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.76",
                "min_intra_species_ani": "96.75",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003447825.1",
                "gtdb_species": "s__REDSEA-S09-B13 sp003447825",
                "ani": 86.4238,
                "matched_fragments": 279,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Arenicellales;f__UBA868;g__REDSEA-S09-B13",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.33",
                "min_intra_species_ani": "99.08",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 16,
                "status": "-"
            },
            {
                "accession": "GCA_003193925.1",
                "gtdb_species": "s__Thalassarchaeum betae",
                "ani": 82.0585,
                "matched_fragments": 187,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.52",
                "min_intra_species_ani": "98.11",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_004195715.1",
                "gtdb_species": "s__Thalassarchaeum sp004195715",
                "ani": 80.5688,
                "matched_fragments": 108,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.86",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_014240285.1",
                "gtdb_species": "s__Thalassarchaeum sp014240285",
                "ani": 79.9367,
                "matched_fragments": 98,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002457605.1",
                "gtdb_species": "s__Thalassarchaeum sp002457605",
                "ani": 79.5376,
                "matched_fragments": 73,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002505325.1",
                "gtdb_species": "s__Thalassarchaeum sp002505325",
                "ani": 79.1349,
                "matched_fragments": 84,
                "total_fragments": 642,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__Thalassarchaeum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.27,
        "cell_length": 0.471,
        "doubling_h": null,
        "growth_tmp": 26.5,
        "optimum_tmp": 26.5,
        "optimum_ph": 8.5,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": null,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__Poseidoniales",
        "f__Thalassarchaeaceae",
        "g__Thalassarchaeum",
        "s__Thalassarchaeum betae_B"
    ],
    "_genome_taxon": [
        "Arenicellales",
        "bacterium",
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__Poseidoniales",
        "f__Thalassarchaeaceae",
        "g__Thalassarchaeum",
        "s__Thalassarchaeum betae_B",
        "Archaea",
        "Thermoplasmatota",
        "Poseidoniia",
        "Poseidoniales",
        "Thalassarchaeaceae",
        "Thalassarchaeum",
        "Thalassarchaeum",
        "betae",
        "B"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}