{
    "type": "genome",
    "identifier": "GCA_025355175.1",
    "organism": "Deltaproteobacteria bacterium",
    "title": "Deltaproteobacteria bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "EPFL",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_025355175.1",
        "bioproject": "PRJNA781406",
        "biosample": "SAMN30206066",
        "wgs_master": "JANYAF000000000.1",
        "refseq_category": "na",
        "taxid": "2026735",
        "species_taxid": "2026735",
        "organism_name": "Deltaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "GL140_5_metabat_185",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/21",
        "asm_name": "ASM2535517v1",
        "submitter": "EPFL",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/355/175/GCA_025355175.1_ASM2535517v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-21",
    "dateModified": "2022-09-21",
    "datePublished": "2022-09-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deltaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "2026735"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Uganda: Stanley glacier"
        ],
        "sample_host_location_id": [],
        "data_size": "0.831 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.69,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2895003",
        "Number of Sequences": "280",
        "Longest Sequences (bp)": "66251",
        "N50 (bp)": "15479",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.7",
        "Number of CDSs": "2497",
        "Average Protein Length": "310.5",
        "Coding Ratio (%)": "80.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.69,
            "strain_heterogeneity": 0.0
        },
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                "accession": "GCA_009773315.1",
                "gtdb_species": "s__UBA8904 sp009773315",
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                "matched_fragments": 628,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903904655.1",
                "gtdb_species": "s__UBA8904 sp903904655",
                "ani": 92.5844,
                "matched_fragments": 575,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002382045.1",
                "gtdb_species": "s__UBA8904 sp002382045",
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                "matched_fragments": 401,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002840435.1",
                "gtdb_species": "s__UBA8904 sp002840435",
                "ani": 81.5286,
                "matched_fragments": 504,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003506745.1",
                "gtdb_species": "s__UBA8904 sp003506745",
                "ani": 80.4376,
                "matched_fragments": 242,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.90",
                "min_intra_species_ani": "97.67",
                "mean_intra_species_af": "0.70",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_009668925.1",
                "gtdb_species": "s__UBA8904 sp009668925",
                "ani": 78.7161,
                "matched_fragments": 359,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002840635.1",
                "gtdb_species": "s__UBA8904 sp002840635",
                "ani": 78.5103,
                "matched_fragments": 257,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003139775.1",
                "gtdb_species": "s__Smithella sp003139775",
                "ani": 78.2432,
                "matched_fragments": 162,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__Smithella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.83",
                "min_intra_species_ani": "99.63",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 14,
                "status": "-"
            },
            {
                "accession": "GCA_002347685.1",
                "gtdb_species": "s__UBA8904 sp002347685",
                "ani": 78.0205,
                "matched_fragments": 284,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012729055.1",
                "gtdb_species": "s__UBA8904 sp012729055",
                "ani": 77.888,
                "matched_fragments": 266,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__UBA8904",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.58",
                "min_intra_species_ani": "99.58",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002840505.1",
                "gtdb_species": "s__Smithella sp002840505",
                "ani": 77.3829,
                "matched_fragments": 140,
                "total_fragments": 821,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__Smithellaceae;g__Smithella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Syntrophia",
        "o__Syntrophales",
        "f__Smithellaceae",
        "g__UBA8904",
        "s__UBA8904 sp025355175"
    ],
    "_genome_taxon": [
        "Deltaproteobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Syntrophia",
        "o__Syntrophales",
        "f__Smithellaceae",
        "g__UBA8904",
        "s__UBA8904 sp025355175",
        "Bacteria",
        "Desulfobacterota",
        "Syntrophia",
        "Syntrophales",
        "Smithellaceae",
        "UBA8904",
        "UBA8904",
        "sp025355175"
    ],
    "_meo": [
        {
            "id": "MEO_0000170",
            "label": "glacier"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}