{
    "type": "genome",
    "identifier": "GCA_025363815.1",
    "organism": "Actinomycetia bacterium",
    "title": "Actinomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "EPFL",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_025363815.1",
        "bioproject": "PRJNA781406",
        "biosample": "SAMN30206125",
        "wgs_master": "JANYLB000000000.1",
        "refseq_category": "na",
        "taxid": "1883427",
        "species_taxid": "1883427",
        "organism_name": "Actinomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "GL140_5_metabinner_8",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/09/21",
        "asm_name": "ASM2536381v1",
        "submitter": "EPFL",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/363/815/GCA_025363815.1_ASM2536381v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-09-21",
    "dateModified": "2022-09-21",
    "datePublished": "2022-09-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Uganda: Stanley glacier"
        ],
        "sample_host_location_id": [],
        "data_size": "0.738 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2676043",
        "Number of Sequences": "62",
        "Longest Sequences (bp)": "175821",
        "N50 (bp)": "78099",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.8",
        "Number of CDSs": "2609",
        "Average Protein Length": "311.8",
        "Coding Ratio (%)": "91.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Rhabdothermincola sediminis",
                "strain": "strain=SYSU G02662",
                "accession": "GCA_014805525.1",
                "taxid": 2751370,
                "species_taxid": 2751370,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3089,
                "matched_fragments": 102,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhabdothermincola salaria",
                "strain": "strain=EGI L10124",
                "accession": "GCA_021246445.1",
                "taxid": 2903142,
                "species_taxid": 2903142,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2575,
                "matched_fragments": 114,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomarinicola tropica",
                "strain": "strain=SCSIO 58843",
                "accession": "GCA_009650215.1",
                "taxid": 2789776,
                "species_taxid": 2789776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1589,
                "matched_fragments": 129,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter fluminis",
                "strain": "strain=DSM 18936",
                "accession": "GCA_004364865.1",
                "taxid": 467091,
                "species_taxid": 467091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.751,
                "matched_fragments": 95,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter nonamiensis",
                "strain": "strain=YM16-303",
                "accession": "GCA_000350145.1",
                "taxid": 467093,
                "species_taxid": 467093,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6531,
                "matched_fragments": 70,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Egicoccus halophilus",
                "strain": "strain=CGMCC 1.14988",
                "accession": "GCA_014640475.1",
                "taxid": 1670830,
                "species_taxid": 1670830,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6445,
                "matched_fragments": 68,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Egicoccus halophilus",
                "strain": "strain=EGI 80432",
                "accession": "GCA_004300825.1",
                "taxid": 1670830,
                "species_taxid": 1670830,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6278,
                "matched_fragments": 69,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desertimonas flava",
                "strain": "strain=SYSU D60003",
                "accession": "GCA_003426815.1",
                "taxid": 2064846,
                "species_taxid": 2064846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5548,
                "matched_fragments": 106,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilumatobacter coccineus",
                "strain": "strain=YM16-304",
                "accession": "GCA_000348785.1",
                "taxid": 467094,
                "species_taxid": 467094,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3447,
                "matched_fragments": 84,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoplanes tereljensis",
                "strain": "strain=NBRC 105297",
                "accession": "GCA_016862435.1",
                "taxid": 571912,
                "species_taxid": 571912,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1652,
                "matched_fragments": 111,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Asanoa ishikariensis",
                "strain": "strain=NBRC 14551",
                "accession": "GCA_016862535.1",
                "taxid": 137265,
                "species_taxid": 137265,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1625,
                "matched_fragments": 95,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Asanoa ishikariensis",
                "strain": "strain=DSM 44718",
                "accession": "GCA_900107455.1",
                "taxid": 137265,
                "species_taxid": 137265,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1553,
                "matched_fragments": 93,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Virgisporangium aliadipatigenens",
                "strain": "strain=NBRC 105644",
                "accession": "GCA_016863615.1",
                "taxid": 741659,
                "species_taxid": 741659,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1294,
                "matched_fragments": 106,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoplanes toevensis",
                "strain": "strain=NBRC 105298",
                "accession": "GCA_018332695.1",
                "taxid": 571911,
                "species_taxid": 571911,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1166,
                "matched_fragments": 114,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis acidicola",
                "strain": "strain=K81G1",
                "accession": "GCA_007713735.2",
                "taxid": 2596893,
                "species_taxid": 2596893,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8558,
                "matched_fragments": 97,
                "total_fragments": 863,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016870395.1",
                "gtdb_species": "s__SHUZ01 sp016870395",
                "ani": 77.4721,
                "matched_fragments": 251,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__IMCC26256;g__SHUZ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017882925.1",
                "gtdb_species": "s__Chersky-534 sp017882925",
                "ani": 77.3906,
                "matched_fragments": 202,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__Chersky-534;g__Chersky-534",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013695115.1",
                "gtdb_species": "s__JACDBD01 sp013695115",
                "ani": 77.322,
                "matched_fragments": 155,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__JACDBD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016870245.1",
                "gtdb_species": "s__CAIUKV01 sp016870245",
                "ani": 77.2914,
                "matched_fragments": 181,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__CAIUKV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016870595.1",
                "gtdb_species": "s__CAIUKV01 sp016870595",
                "ani": 77.0983,
                "matched_fragments": 167,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__CAIUKV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017882945.1",
                "gtdb_species": "s__Chersky-806 sp017882945",
                "ani": 76.9838,
                "matched_fragments": 226,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__IMCC26256;g__Chersky-806",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903899845.1",
                "gtdb_species": "s__CAIUKV01 sp903899845",
                "ani": 76.8733,
                "matched_fragments": 171,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__CAIUKV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.48",
                "min_intra_species_ani": "99.41",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017853455.1",
                "gtdb_species": "s__CAIUKV01 sp017853455",
                "ani": 76.8664,
                "matched_fragments": 135,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__CAIUKV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003140175.1",
                "gtdb_species": "s__PALSA-555 sp003140175",
                "ani": 76.8373,
                "matched_fragments": 171,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__PALSA-555",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003134555.1",
                "gtdb_species": "s__PALSA-610 sp003134555",
                "ani": 76.6257,
                "matched_fragments": 200,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-610;g__PALSA-610",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016650415.1",
                "gtdb_species": "s__JAENVU01 sp016650415",
                "ani": 76.6178,
                "matched_fragments": 145,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__IMCC26256;g__JAENVU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016185275.1",
                "gtdb_species": "s__JACPNX01 sp016185275",
                "ani": 76.0868,
                "matched_fragments": 105,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__JAAYBP01;g__JACPNX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003697065.1",
                "gtdb_species": "s__J010 sp003697065",
                "ani": 75.8907,
                "matched_fragments": 72,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA11606;g__J010",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004364865.1",
                "gtdb_species": "s__Ilumatobacter fluminis",
                "ani": 75.751,
                "matched_fragments": 95,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__Ilumatobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007713735.2",
                "gtdb_species": "s__Amycolatopsis acidicola",
                "ani": 74.8558,
                "matched_fragments": 97,
                "total_fragments": 863,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__IMCC26256",
        "f__JANYLB01",
        "g__JANYLB01",
        "s__JANYLB01 sp025363815"
    ],
    "_genome_taxon": [
        "Actinomycetia",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__IMCC26256",
        "f__JANYLB01",
        "g__JANYLB01",
        "s__JANYLB01 sp025363815",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "IMCC26256",
        "JANYLB01",
        "JANYLB01",
        "JANYLB01",
        "sp025363815"
    ],
    "_meo": [
        {
            "id": "MEO_0000170",
            "label": "glacier"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}