{ "tc_result": [ { "organism_name": "Nocardioides panacis", "strain": "strain=G188", "accession": "GCA_019039255.1", "taxid": 2849501, "species_taxid": 2849501, "relation_to_type": "type", "validated": true, "ani": 82.1033, "matched_fragments": 664, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides iriomotensis", "strain": "strain=NBRC 105384", "accession": "GCA_004168035.1", "taxid": 715784, "species_taxid": 715784, "relation_to_type": "type", "validated": true, "ani": 80.1287, "matched_fragments": 547, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides panaciterrulae", "strain": "strain=DSM 21350", "accession": "GCA_013409645.1", "taxid": 661492, "species_taxid": 661492, "relation_to_type": "type", "validated": true, "ani": 79.2475, "matched_fragments": 472, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides dongkuii", "strain": "strain=S-713", "accession": "GCA_014127485.1", "taxid": 2760089, "species_taxid": 2760089, "relation_to_type": "type", "validated": true, "ani": 79.2151, "matched_fragments": 424, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides donggukensis", "strain": "strain=MJB4", "accession": "GCA_014842875.1", "taxid": 2774019, "species_taxid": 2774019, "relation_to_type": "type", "validated": true, "ani": 79.2057, "matched_fragments": 431, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marmoricola aurantiacus", "strain": "strain=DSM 12652", "accession": "GCA_003752505.1", "taxid": 86796, "species_taxid": 86796, "relation_to_type": "type", "validated": true, "ani": 79.1013, "matched_fragments": 428, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marmoricola scoriae", "strain": "strain=DSM 22127", "accession": "GCA_900104965.1", "taxid": 642780, "species_taxid": 642780, "relation_to_type": "type", "validated": true, "ani": 79.0983, "matched_fragments": 454, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides guangzhouensis", "strain": "strain=130", "accession": "GCA_004519545.1", "taxid": 2497878, "species_taxid": 2497878, "relation_to_type": "type", "validated": true, "ani": 79.0658, "matched_fragments": 483, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ferulae", "strain": "strain=SZ4R5S7", "accession": "GCA_003660455.1", "taxid": 2340821, "species_taxid": 2340821, "relation_to_type": "type", "validated": true, "ani": 78.9419, "matched_fragments": 462, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides luti", "strain": "strain=KIGAM211", "accession": "GCA_014212315.1", "taxid": 2761101, "species_taxid": 2761101, "relation_to_type": "type", "validated": true, "ani": 78.9393, "matched_fragments": 455, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides massiliensis", "strain": "strain=GD13", "accession": "GCA_900067705.2", "taxid": 1325935, "species_taxid": 1325935, "relation_to_type": "type", "validated": true, "ani": 78.9334, "matched_fragments": 289, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides halotolerans", "strain": "strain=DSM 19273", "accession": "GCA_000422805.1", "taxid": 433660, "species_taxid": 433660, "relation_to_type": "type", "validated": true, "ani": 78.8979, "matched_fragments": 425, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides soli", "strain": "strain=DSM 105498", "accession": "GCA_014191495.1", "taxid": 1036020, "species_taxid": 1036020, "relation_to_type": "type", "validated": true, "ani": 78.844, "matched_fragments": 455, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides dokdonensis", "strain": "strain=FR1436", "accession": "GCA_001653335.1", "taxid": 450734, "species_taxid": 450734, "relation_to_type": "type", "validated": true, "ani": 78.7601, "matched_fragments": 411, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides cynanchi", "strain": "strain=SB3-45", "accession": "GCA_008761635.1", "taxid": 2558918, "species_taxid": 2558918, "relation_to_type": "type", "validated": true, "ani": 78.7472, "matched_fragments": 428, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides agariphilus", "strain": "strain=KCTC 19276", "accession": "GCA_015352445.1", "taxid": 433664, "species_taxid": 433664, "relation_to_type": "type", "validated": true, "ani": 78.7446, "matched_fragments": 397, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides salarius", "strain": "strain=DSM 18239", "accession": "GCA_015339545.1", "taxid": 374513, "species_taxid": 374513, "relation_to_type": "type", "validated": true, "ani": 78.6964, "matched_fragments": 440, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 78.6931, "matched_fragments": 425, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides islandensis", "strain": "strain=KCTC 19275", "accession": "GCA_015352455.1", "taxid": 433663, "species_taxid": 433663, "relation_to_type": "type", "validated": true, "ani": 78.6651, "matched_fragments": 470, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides currus", "strain": "strain=IB-3", "accession": "GCA_003057875.1", "taxid": 2133958, "species_taxid": 2133958, "relation_to_type": "type", "validated": true, "ani": 78.6601, "matched_fragments": 421, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides houyundeii", "strain": "strain=78", "accession": "GCA_002865585.1", "taxid": 2045452, "species_taxid": 2045452, "relation_to_type": "type", "validated": true, "ani": 78.55, "matched_fragments": 358, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides hwasunensis", "strain": "strain=19197", "accession": "GCA_014779665.1", "taxid": 397258, "species_taxid": 397258, "relation_to_type": "type", "validated": true, "ani": 78.4773, "matched_fragments": 388, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides baculatus", "strain": "strain=G10", "accession": "GCA_016735675.1", "taxid": 2801337, "species_taxid": 2801337, "relation_to_type": "type", "validated": true, "ani": 78.4755, "matched_fragments": 412, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ganghwensis", "strain": "strain=9920", "accession": "GCA_014779655.1", "taxid": 252230, "species_taxid": 252230, "relation_to_type": "type", "validated": true, "ani": 78.4181, "matched_fragments": 405, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides cavernaquae", "strain": "strain=K1W22B-1", "accession": "GCA_003600895.1", "taxid": 2321396, "species_taxid": 2321396, "relation_to_type": "type", "validated": true, "ani": 78.2652, "matched_fragments": 291, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides albidus", "strain": "strain=CCTCC AB 2015297", "accession": "GCA_006335005.1", "taxid": 1517589, "species_taxid": 1517589, "relation_to_type": "type", "validated": true, "ani": 78.2033, "matched_fragments": 395, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.25, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_019039255.1", "gtdb_species": "s__JABFXA01 sp019039255", "ani": 82.0949, "matched_fragments": 664, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__JABFXA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013361955.1", "gtdb_species": "s__JABFXA01 sp013361955", "ani": 81.0843, "matched_fragments": 539, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__JABFXA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.75", "min_intra_species_ani": "99.75", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014395785.1", "gtdb_species": "s__Nocardioides_B mesophilus", "ani": 80.6765, "matched_fragments": 540, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004168035.1", "gtdb_species": "s__Nocardioides_B iriomotensis", "ani": 80.1191, "matched_fragments": 548, "total_fragments": 1048, "gtdb_taxonomy": 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.37", "min_intra_species_ani": "99.37", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004519545.1", "gtdb_species": "s__Nocardioides guangzhouensis", "ani": 79.0728, "matched_fragments": 484, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001424755.1", "gtdb_species": "s__Marmoricola sp001424755", "ani": 79.0708, "matched_fragments": 447, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003752505.1", "gtdb_species": "s__Marmoricola aurantiacus", "ani": 79.0647, "matched_fragments": 431, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000426045.1", "gtdb_species": "s__Marmoricola sp000426045", "ani": 79.0216, "matched_fragments": 450, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902805855.1", "gtdb_species": "s__UBA4001 sp902805855", "ani": 79.0115, "matched_fragments": 368, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__UBA4001", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003660455.1", "gtdb_species": "s__Nocardioides ferulae", "ani": 78.9413, "matched_fragments": 462, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014212315.1", "gtdb_species": "s__Nocardioides luti", "ani": 78.9306, "matched_fragments": 456, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003725535.1", "gtdb_species": "s__Marmoricola pocheonensis", "ani": 78.7474, "matched_fragments": 438, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Marmoricola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015352455.1", "gtdb_species": "s__Nocardioides islandensis", "ani": 78.6517, "matched_fragments": 469, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002865585.1", "gtdb_species": "s__Nocardioides houyundeii", "ani": 78.5566, "matched_fragments": 356, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.48", "min_intra_species_ani": "96.00", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014266025.1", "gtdb_species": "s__Nocardioides deserti", "ani": 78.552, "matched_fragments": 443, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017354415.1", "gtdb_species": "s__Nocardioides sp017354415", "ani": 78.4189, "matched_fragments": 332, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001627335.1", "gtdb_species": "s__Nocardioides sp001627335", "ani": 78.3276, "matched_fragments": 355, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.38", "min_intra_species_ani": "96.50", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 12, "status": "-" } ] }