{ "type": "genome", "identifier": "GCA_025936155.1", "organism": "Rhodanobacteraceae bacterium", "title": "Rhodanobacteraceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "CAU", "publication": [ {} ], "properties": { "assembly_accession": "GCA_025936155.1", "bioproject": "PRJNA744024", "biosample": "SAMN20133043", "wgs_master": "JAICTY000000000.1", "refseq_category": "na", "taxid": "2052182", "species_taxid": "2052182", "organism_name": "Rhodanobacteraceae bacterium", "infraspecific_name": "", "isolate": "GZL_ISSM_2_bin.44", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/01", "asm_name": "ASM2593615v1", "submitter": "CAU", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/936/155/GCA_025936155.1_ASM2593615v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-01", "dateModified": "2022-11-01", "datePublished": "2022-11-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodanobacteraceae bacterium" ], "sample_taxid": [ "2052182" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Gongzhuling" ], "sample_host_location_id": [], "data_size": "0.841 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 70.45, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3002227", "Number of Sequences": "458", "Longest Sequences (bp)": "33256", "N50 (bp)": "8615", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.7", "Number of CDSs": "2275", "Average Protein Length": "311.3", "Coding Ratio (%)": "70.8", "Number of rRNAs": "1", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Fulvimonas soli", "strain": "strain=LMG 19981", "accession": "GCA_006352285.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 78.0232, "matched_fragments": 277, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=DSM 14263", "accession": "GCA_003148905.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 78.0064, "matched_fragments": 289, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodanobacter denitrificans", "strain": "strain=2APBS1", "accession": 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"relation_to_type": "type", "validated": true, "ani": 77.8474, "matched_fragments": 245, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oleiagrimonas citrea", "strain": "strain=MEBiC09124", "accession": "GCA_012395255.1", "taxid": 1665687, "species_taxid": 1665687, "relation_to_type": "type", "validated": true, "ani": 77.841, "matched_fragments": 216, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodanobacter thiooxydans", "strain": "strain=LCS2", "accession": "GCA_000264375.1", "taxid": 416169, "species_taxid": 416169, "relation_to_type": "type", "validated": true, "ani": 77.8209, "matched_fragments": 292, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dyella acidiphila", "strain": "strain=7MK23", "accession": "GCA_014863405.1", "taxid": 2775866, "species_taxid": 2775866, "relation_to_type": "type", "validated": true, "ani": 77.7883, "matched_fragments": 222, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oleiagrimonas soli", "strain": "strain=3.5X", "accession": "GCA_000761445.1", "taxid": 1543381, "species_taxid": 1543381, "relation_to_type": "type", "validated": true, "ani": 77.7836, "matched_fragments": 258, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frateuria flava", "strain": "strain=MAH-13", "accession": "GCA_017837635.1", "taxid": 2821489, "species_taxid": 2821489, "relation_to_type": "type", "validated": true, "ani": 77.7038, "matched_fragments": 243, "total_fragments": 760, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodanobacter panaciterrae", "strain": "strain=KCTC 22232", "accession": "GCA_014651895.1", "taxid": 490572, "species_taxid": 490572, "relation_to_type": "type", "validated": true, "ani": 77.6507, "matched_fragments": 223, "total_fragments": 760, "ani_threshold": 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