{ "type": "genome", "identifier": "GCA_025964585.1", "organism": "Actinomycetia bacterium", "title": "Actinomycetia bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Colorado State University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_025964585.1", "bioproject": "PRJNA682830", "biosample": "SAMN17837316", "wgs_master": "JAOPYN000000000.1", "refseq_category": "na", "taxid": "1883427", "species_taxid": "1883427", "organism_name": "Actinomycetia bacterium", "infraspecific_name": "", "isolate": "RYN_228", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/02", "asm_name": "ASM2596458v1", "submitter": "Colorado State University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/025/964/585/GCA_025964585.1_ASM2596458v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-02", "dateModified": "2022-11-02", "datePublished": "2022-11-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomycetia bacterium" ], "sample_taxid": [ "1883427" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA:Wyoming" ], "sample_host_location_id": [], "data_size": "2.009 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 90.62, "contamination": 10.94, "strain_heterogeneity": 50.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "7303980", "Number of Sequences": "1009", "Longest Sequences (bp)": "61131", "N50 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"GCA_024055725.1", "taxid": 79912, "species_taxid": 79912, "relation_to_type": "type", "validated": true, "ani": 76.539, "matched_fragments": 462, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium rufum", "strain": "strain=NBRC 109079", "accession": "GCA_016863395.1", "taxid": 1381558, "species_taxid": 1381558, "relation_to_type": "type", "validated": true, "ani": 76.4362, "matched_fragments": 507, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoallomurus purpureus", "strain": "strain=KCTC 19541", "accession": "GCA_024055795.1", "taxid": 478114, "species_taxid": 478114, "relation_to_type": "type", "validated": true, "ani": 76.4359, "matched_fragments": 436, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura macrotermitis", "strain": "strain=RB68", "accession": "GCA_009604375.1", "taxid": 2585200, "species_taxid": 2585200, "relation_to_type": "type", "validated": true, "ani": 76.4322, "matched_fragments": 549, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura oligospora", "strain": "strain=ATCC 43269", "accession": "GCA_000518265.1", "taxid": 111804, "species_taxid": 111804, "relation_to_type": "type", "validated": true, "ani": 76.4288, "matched_fragments": 495, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium melleum", "strain": "strain=JCM 13064", "accession": "GCA_014646695.1", "taxid": 321316, "species_taxid": 321316, "relation_to_type": "type", "validated": true, "ani": 76.4263, "matched_fragments": 441, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura geliboluensis", "strain": "strain=A8036", "accession": "GCA_005889745.1", "taxid": 882440, "species_taxid": 882440, "relation_to_type": "type", "validated": true, "ani": 76.4142, "matched_fragments": 508, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microtetraspora malaysiensis", "strain": "strain=NBRC 100735", "accession": "GCA_001528665.1", "taxid": 161358, "species_taxid": 161358, "relation_to_type": "type", "validated": true, "ani": 76.3902, "matched_fragments": 440, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microtetraspora niveoalba", "strain": "strain=NBRC 15239", "accession": "GCA_001570405.1", "taxid": 46175, "species_taxid": 46175, "relation_to_type": "type", "validated": true, "ani": 76.3496, "matched_fragments": 443, "total_fragments": 1957, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium rubeum", "strain": "strain=DSM 44936", "accession": "GCA_014207705.1", "taxid": 321317, "species_taxid": 321317, "relation_to_type": "type", "validated": true, "ani": 76.344, 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