{
    "type": "genome",
    "identifier": "GCA_026004155.1",
    "organism": "Meiothermus sp.",
    "title": "Meiothermus sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "RIKEN-BRC",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026004155.1",
        "bioproject": "PRJDB11609",
        "biosample": "SAMD00319398",
        "wgs_master": "BPIO00000000.1",
        "refseq_category": "na",
        "taxid": "1955249",
        "species_taxid": "1955249",
        "organism_name": "Meiothermus sp.",
        "infraspecific_name": "",
        "isolate": "KatS3mg074",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/10/11",
        "asm_name": "ASM2600415v1",
        "submitter": "RIKEN-BRC",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/004/155/GCA_026004155.1_ASM2600415v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-10-11",
    "dateModified": "2022-10-11",
    "datePublished": "2022-10-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Meiothermus sp."
        ],
        "sample_taxid": [
            "1955249"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan:Shizuoka, Higashi-izu, Arayu"
        ],
        "sample_host_location_id": [],
        "data_size": "0.283 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 50.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1007788",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "1007788",
        "N50 (bp)": "1007788",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.3",
        "Number of CDSs": "917",
        "Average Protein Length": "319.2",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "17",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Meiothermus hypogaeus",
                "strain": "strain=DSM 23238",
                "accession": "GCA_003574035.1",
                "taxid": 884155,
                "species_taxid": 884155,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.2895,
                "matched_fragments": 309,
                "total_fragments": 335,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Meiothermus hypogaeus",
                "strain": "strain=NBRC 106114",
                "accession": "GCA_007990975.1",
                "taxid": 884155,
                "species_taxid": 884155,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.2025,
                "matched_fragments": 288,
                "total_fragments": 335,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Meiothermus ruber",
                "strain": "strain=DSM 1279",
                "accession": "GCA_000024425.1",
                "taxid": 277,
                "species_taxid": 277,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.5425,
                "matched_fragments": 230,
                "total_fragments": 335,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Meiothermus ruber",
                "strain": "strain=DSM 1279",
                "accession": "GCA_000376665.1",
                "taxid": 277,
                "species_taxid": 277,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.4983,
                "matched_fragments": 221,
                "total_fragments": 335,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 50.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_003574035.1",
                "gtdb_species": "s__Meiothermus hypogaeus",
                "ani": 99.2895,
                "matched_fragments": 309,
                "total_fragments": 335,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Meiothermus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.94",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_017497985.1",
                "gtdb_species": "s__Meiothermus sp017497985",
                "ani": 87.0124,
                "matched_fragments": 256,
                "total_fragments": 335,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Meiothermus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000024425.1",
                "gtdb_species": "s__Meiothermus ruber",
                "ani": 81.5425,
                "matched_fragments": 230,
                "total_fragments": 335,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Meiothermus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.09",
                "min_intra_species_ani": "97.58",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_011327565.1",
                "gtdb_species": "s__Meiothermus ruber_A",
                "ani": 81.5372,
                "matched_fragments": 212,
                "total_fragments": 335,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Meiothermus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.318,
        "cell_length": 0.184,
        "doubling_h": 0.229,
        "growth_tmp": 51.073,
        "optimum_tmp": 53.75,
        "optimum_ph": 7.88,
        "genome_size": 3457528.316,
        "gc_content": 63.423,
        "coding_genes": 3260.5,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 48.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.125,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.875,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Deinococcota",
        "c__Deinococci",
        "o__Deinococcales",
        "f__Thermaceae",
        "g__Meiothermus",
        "s__Meiothermus hypogaeus"
    ],
    "_genome_taxon": [
        "Meiothermus",
        "sp.",
        "d__Bacteria",
        "p__Deinococcota",
        "c__Deinococci",
        "o__Deinococcales",
        "f__Thermaceae",
        "g__Meiothermus",
        "s__Meiothermus hypogaeus",
        "Bacteria",
        "Deinococcota",
        "Deinococci",
        "Deinococcales",
        "Thermaceae",
        "Meiothermus",
        "Meiothermus",
        "hypogaeus"
    ],
    "_meo": [
        {
            "id": "MEO_0000029",
            "label": "hot spring"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}