{ "type": "genome", "identifier": "GCA_026129405.1", "organism": "bacterium", "title": "bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University of Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026129405.1", "bioproject": "PRJNA728822", "biosample": "SAMN19104336", "wgs_master": "JAHCID000000000.1", "refseq_category": "na", "taxid": "1869227", "species_taxid": "1869227", "organism_name": "bacterium", "infraspecific_name": "", "isolate": "TGS_BIN1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/10", "asm_name": "ASM2612940v1", "submitter": "The University of Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/129/405/GCA_026129405.1_ASM2612940v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-10", "dateModified": "2022-11-10", "datePublished": "2022-11-10", "_annotation": { "sample_count": 1, "sample_organism": [ "bacterium" ], "sample_taxid": [ "1869227" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Hong Kong" ], "sample_host_location_id": [], "data_size": "1.476 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5632691", "Number of Sequences": "15", "Longest Sequences (bp)": "1862956", "N50 (bp)": "665690", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "72.8", "Number of CDSs": "5182", "Average Protein Length": "333.7", "Coding Ratio (%)": "92.1", "Number of rRNAs": "3", "Number of tRNAs": "58", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Geomonas agri", "strain": "strain=RG53", "accession": "GCA_020179605.1", "taxid": 2873702, "species_taxid": 2873702, "relation_to_type": "type", "validated": true, "ani": 76.0016, "matched_fragments": 69, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amorphus coralli", "strain": "strain=DSM 19760", "accession": "GCA_000374525.1", "taxid": 340680, "species_taxid": 340680, "relation_to_type": "type", "validated": true, "ani": 75.3466, "matched_fragments": 141, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plasticicumulans lactativorans", "strain": "strain=DSM 25287", "accession": "GCA_004341245.1", "taxid": 1133106, "species_taxid": 1133106, "relation_to_type": "type", "validated": true, "ani": 75.296, "matched_fragments": 392, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas helianthi", "strain": "strain=110414", "accession": "GCA_017939625.1", "taxid": 1453541, "species_taxid": 1453541, "relation_to_type": "type", "validated": true, "ani": 75.2636, "matched_fragments": 143, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaeromyxobacter dehalogenans", "strain": "strain=2CP-1", "accession": "GCA_000022145.1", "taxid": 161493, "species_taxid": 161493, "relation_to_type": "type", "validated": true, "ani": 75.2595, "matched_fragments": 497, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas sangjuensis", "strain": "strain=DSM 28345", "accession": "GCA_010211755.1", "taxid": 1503750, "species_taxid": 1503750, "relation_to_type": "type", "validated": true, "ani": 75.2427, "matched_fragments": 216, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conexibacter arvalis", "strain": "strain=DSM 23288", "accession": "GCA_014199525.1", "taxid": 912552, "species_taxid": 912552, "relation_to_type": "type", "validated": true, "ani": 75.1938, "matched_fragments": 585, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio nitratireducens", "strain": "strain=DSM 14787", "accession": "GCA_000321415.2", "taxid": 186931, "species_taxid": 186931, "relation_to_type": "type", "validated": true, "ani": 75.1898, "matched_fragments": 101, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ferruginivarius sediminum", "strain": "strain=WD2A32", "accession": "GCA_003344765.1", "taxid": 2661937, "species_taxid": 2661937, "relation_to_type": "type", "validated": true, "ani": 75.1747, "matched_fragments": 129, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium nonmethylotrophicum", "strain": "strain=6HR-1", "accession": "GCA_004745635.1", "taxid": 1141884, "species_taxid": 1141884, "relation_to_type": "type", "validated": true, "ani": 75.1665, "matched_fragments": 421, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=LMG 19981", "accession": "GCA_006352285.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 75.1461, "matched_fragments": 300, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=DSM 14263", "accession": "GCA_003148905.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 75.1096, "matched_fragments": 313, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conexibacter woesei", "strain": "strain=DSM 14684", "accession": "GCA_000025265.1", "taxid": 191495, "species_taxid": 191495, "relation_to_type": "type", "validated": true, "ani": 75.0974, "matched_fragments": 596, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000420125.1", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 75.0941, "matched_fragments": 353, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thalassobaculum fulvum", "strain": "strain=KCTC 42651", "accession": "GCA_014652915.1", "taxid": 1633335, "species_taxid": 1633335, "relation_to_type": "type", "validated": true, "ani": 75.0894, "matched_fragments": 350, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_004340905.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 75.071, "matched_fragments": 393, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_016583525.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 75.0619, "matched_fragments": 398, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pleomorphomonas carboxyditropha", "strain": "strain=SVCO-16", "accession": "GCA_002770725.1", "taxid": 2023338, "species_taxid": 2023338, "relation_to_type": "type", "validated": true, "ani": 75.0616, "matched_fragments": 282, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas wenzhouensis", "strain": "strain=YD-1", "accession": "GCA_007859305.1", "taxid": 2599615, "species_taxid": 2599615, "relation_to_type": "type", "validated": true, "ani": 75.055, "matched_fragments": 258, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax benzoatilyticus", "strain": "strain=JA2", "accession": "GCA_000190375.2", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 75.05, "matched_fragments": 345, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium callitrichos", "strain": "strain=DSM 23973", "accession": "GCA_000741175.1", "taxid": 762209, "species_taxid": 762209, "relation_to_type": "type", "validated": true, "ani": 75.0419, "matched_fragments": 75, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solirubrobacter pauli", "strain": "strain=DSM 14954", "accession": "GCA_003633755.1", "taxid": 166793, "species_taxid": 166793, "relation_to_type": "type", "validated": true, "ani": 75.0342, "matched_fragments": 537, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraconexibacter algicola", "strain": "strain=Seoho-28", "accession": "GCA_003044185.1", "taxid": 2133960, "species_taxid": 2133960, "relation_to_type": "type", "validated": true, "ani": 75.0078, "matched_fragments": 441, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jeongeupia naejangsanensis", "strain": "strain=DSM 24253", "accession": "GCA_016865585.1", "taxid": 613195, "species_taxid": 613195, "relation_to_type": "type", "validated": true, "ani": 74.9968, "matched_fragments": 105, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas winnipegensis", "strain": "strain=NML 130738", "accession": "GCA_004283755.1", "taxid": 2480810, "species_taxid": 2480810, "relation_to_type": "type", "validated": true, "ani": 74.9954, "matched_fragments": 228, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arhodomonas aquaeolei", "strain": "strain=DSM 8974", "accession": "GCA_000374645.1", "taxid": 2369, "species_taxid": 2369, "relation_to_type": "type", "validated": true, "ani": 74.9596, "matched_fragments": 190, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea cavernae", "strain": "strain=CGMCC 4.7367", "accession": "GCA_014653695.1", "taxid": 2020703, "species_taxid": 2020703, "relation_to_type": "type", "validated": true, "ani": 74.8909, "matched_fragments": 323, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "strain=UQM 2246", "accession": "GCA_000171775.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 74.874, "matched_fragments": 218, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "strain=DSM 5831", "accession": "GCA_003149495.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 74.868, "matched_fragments": 231, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas cellasea", "strain": "strain=NBRC 3753", "accession": "GCA_006538745.1", "taxid": 43670, "species_taxid": 43670, "relation_to_type": "type", "validated": true, "ani": 74.8628, "matched_fragments": 458, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "strain=DSM 5831", "accession": "GCA_008065095.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 74.8586, "matched_fragments": 230, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "", "accession": "GCA_901538385.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 74.8495, "matched_fragments": 235, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium callitrichos", "strain": "strain=DSM 23973", "accession": "GCA_000771665.1", "taxid": 762209, "species_taxid": 762209, "relation_to_type": "type", "validated": true, "ani": 74.8373, "matched_fragments": 70, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseimaritima sediminicola", "strain": "strain=JC651", "accession": "GCA_009618275.1", "taxid": 2662066, "species_taxid": 2662066, "relation_to_type": "type", "validated": true, "ani": 74.7987, "matched_fragments": 58, "total_fragments": 1870, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_005879795.1", "gtdb_species": "s__DP-6 sp005879795", "ani": 78.0804, "matched_fragments": 588, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__DP-6;g__DP-6", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005888095.1", "gtdb_species": "s__DP-3 sp005888095", "ani": 77.9465, "matched_fragments": 651, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__DP-6;g__DP-3", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "98.46", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_005879585.1", "gtdb_species": "s__DP-3 sp005879585", "ani": 77.7482, "matched_fragments": 600, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__DP-6;g__DP-3", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005879205.1", "gtdb_species": "s__DP-3 sp005879205", "ani": 77.422, "matched_fragments": 519, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__DP-6;g__DP-3", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005879245.1", "gtdb_species": "s__DP-23 sp005879245", "ani": 77.268, "matched_fragments": 296, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__DP-6;g__DP-23", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.46", "min_intra_species_ani": "97.46", "mean_intra_species_af": "0.74", "min_intra_species_af": "0.74", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_005879405.1", "gtdb_species": "s__DP-19 sp005879405", "ani": 76.5873, "matched_fragments": 492, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__UTPRO1;g__DP-19", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017853315.1", "gtdb_species": "s__REEB422 sp017853315", "ani": 76.4764, "matched_fragments": 437, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UBA12015;f__UBA12015;g__REEB422", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016200545.1", "gtdb_species": "s__DP-19 sp016200545", "ani": 76.4203, "matched_fragments": 473, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__UTPRO1;g__DP-19", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002050235.1", "gtdb_species": "s__UTPRO1 sp002050235", "ani": 76.4133, "matched_fragments": 463, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota_B;c__Binatia;o__UTPRO1;f__UTPRO1;g__UTPRO1", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000621145.1", "gtdb_species": "s__Desulfobulbus elongatus", "ani": 75.598, "matched_fragments": 69, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__Desulfobulbus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013340205.1", "gtdb_species": "s__R267 sp013340205", "ani": 75.3265, "matched_fragments": 470, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Anaeromyxobacteraceae;g__R267", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016928695.1", "gtdb_species": "s__JAFGKF01 sp016928695", "ani": 75.1841, "matched_fragments": 105, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Sumerlaeota;c__Sumerlaeia;o__JABWBI01;f__JABWBI01;g__JAFGKF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005884005.1", "gtdb_species": "s__13-2-20CM-68-14 sp005884005", "ani": 75.0181, "matched_fragments": 124, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Gaiellales;f__Gaiellaceae;g__13-2-20CM-68-14", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.02", "min_intra_species_ani": "99.02", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_009694305.1", "gtdb_species": "s__Gaiella sp009694305", "ani": 74.9782, "matched_fragments": 70, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Gaiellales;f__Gaiellaceae;g__Gaiella", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009885805.1", "gtdb_species": "s__VFJZ01 sp009885805", "ani": 74.9117, "matched_fragments": 249, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Gaiellales;f__F1-60-MAGs149;g__VFJZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005884515.1", "gtdb_species": "s__AC-67 sp005884515", "ani": 74.9039, "matched_fragments": 81, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__UBA4738;o__AC-67;f__AC-67;g__AC-67", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902806335.1", "gtdb_species": "s__CADCWG01 sp902806335", "ani": 74.8454, "matched_fragments": 246, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__UBA6265;g__CADCWG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_005883175.1", "gtdb_species": "s__AC-67 sp005883175", "ani": 74.8158, "matched_fragments": 61, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__UBA4738;o__AC-67;f__AC-67;g__AC-67", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.81", "min_intra_species_ani": "95.81", "mean_intra_species_af": "0.74", "min_intra_species_af": "0.74", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_005778355.1", "gtdb_species": "s__SXON01 sp005778355", "ani": 74.6303, "matched_fragments": 225, "total_fragments": 1870, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA796;o__UBA796;f__SXON01;g__SXON01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.89", "min_intra_species_ani": "99.88", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_gtdb_taxon": [ "d__Bacteria", "p__Desulfobacterota_B", "c__Binatia", "o__DP-6", "f__DP-6", "g__JAHCID01", "s__JAHCID01 sp026129405" ], "_genome_taxon": [ "bacterium", "d__Bacteria", "p__Desulfobacterota_B", "c__Binatia", "o__DP-6", "f__DP-6", "g__JAHCID01", "s__JAHCID01 sp026129405", "Bacteria", "Desulfobacterota", "B", "Binatia", "DP-6", "DP-6", "JAHCID01", "JAHCID01", "sp026129405" ], "_meo": [ { "id": "MEO_0000014", "label": "activated sludge" } ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }