{
    "type": "genome",
    "identifier": "GCA_026129485.1",
    "organism": "Cyclobacteriaceae bacterium",
    "title": "Cyclobacteriaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026129485.1",
        "bioproject": "PRJNA728822",
        "biosample": "SAMN19104330",
        "wgs_master": "JAHCHY000000000.1",
        "refseq_category": "na",
        "taxid": "2099675",
        "species_taxid": "2099675",
        "organism_name": "Cyclobacteriaceae bacterium",
        "infraspecific_name": "",
        "isolate": "TGS_BAC9",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/10",
        "asm_name": "ASM2612948v1",
        "submitter": "The University of Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/129/485/GCA_026129485.1_ASM2612948v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-10",
    "dateModified": "2022-11-10",
    "datePublished": "2022-11-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cyclobacteriaceae bacterium"
        ],
        "sample_taxid": [
            "2099675"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Hong Kong"
        ],
        "sample_host_location_id": [],
        "data_size": "1.158 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4075102",
        "Number of Sequences": "40",
        "Longest Sequences (bp)": "372851",
        "N50 (bp)": "175358",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.9",
        "Number of CDSs": "3501",
        "Average Protein Length": "351.9",
        "Coding Ratio (%)": "90.7",
        "Number of rRNAs": "2",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Chryseolinea soli",
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                "accession": "GCA_003589925.1",
                "taxid": 2321403,
                "species_taxid": 2321403,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 98,
                "total_fragments": 1338,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseolinea serpens",
                "strain": "strain=DSM 24574",
                "accession": "GCA_900129725.1",
                "taxid": 947013,
                "species_taxid": 947013,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1625,
                "matched_fragments": 85,
                "total_fragments": 1338,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chryseosolibacter histidini",
                "strain": "strain=PWU4",
                "accession": "GCA_018598225.1",
                "taxid": 2782349,
                "species_taxid": 2782349,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9548,
                "matched_fragments": 77,
                "total_fragments": 1338,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dawidia cretensis",
                "strain": "strain=PWU5",
                "accession": "GCA_018598175.1",
                "taxid": 2782350,
                "species_taxid": 2782350,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.95,
                "matched_fragments": 62,
                "total_fragments": 1338,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dawidia soli",
                "strain": "strain=PWU37",
                "accession": "GCA_018598185.1",
                "taxid": 2782352,
                "species_taxid": 2782352,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7106,
                "matched_fragments": 82,
                "total_fragments": 1338,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_017303795.1",
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                "matched_fragments": 643,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001567185.1",
                "gtdb_species": "s__ELB16-189 sp001567185",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.67",
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                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013414665.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002352225.1",
                "gtdb_species": "s__ELB16-189 sp002352225",
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                "matched_fragments": 566,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.83",
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                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 4,
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            },
            {
                "accession": "GCA_017303805.1",
                "gtdb_species": "s__ELB16-189 sp017303805",
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                "matched_fragments": 512,
                "total_fragments": 1338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016787725.1",
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                "matched_fragments": 215,
                "total_fragments": 1338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018063305.1",
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                "matched_fragments": 113,
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_015180985.1",
                "gtdb_species": "s__UBA2336 sp015180985",
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            {
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_018598185.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.371,
        "cell_length": 0.212,
        "doubling_h": 0.69,
        "growth_tmp": 29.892,
        "optimum_tmp": 29.982,
        "optimum_ph": 7.789,
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        "gc_content": 42.262,
        "coding_genes": 4476.416,
        "rRNA16S_genes": 3.75,
        "tRNA_genes": 40.25,
        "gram_stain": 0.0,
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        "range_salinity": 1.0,
        "facultative_respiration": 0.022,
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        "bacillus_cell_shape": 0.9,
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    "_gtdb_taxon": [
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        "s__ELB16-189 sp026129485"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Cytophagales",
        "f__Cyclobacteriaceae",
        "g__ELB16-189",
        "s__ELB16-189 sp026129485",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Cytophagales",
        "Cyclobacteriaceae",
        "ELB16-189",
        "ELB16-189",
        "sp026129485"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}