{ "type": "genome", "identifier": "GCA_026129495.1", "organism": "Cyclobacteriaceae bacterium", "title": "Cyclobacteriaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University of Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_026129495.1", "bioproject": "PRJNA728822", "biosample": "SAMN19104331", "wgs_master": "JAHCHZ000000000.1", "refseq_category": "na", "taxid": "2099675", "species_taxid": "2099675", "organism_name": "Cyclobacteriaceae bacterium", "infraspecific_name": "", "isolate": "TGS_BAC10", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/11/10", "asm_name": "ASM2612949v1", "submitter": "The University of Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/129/495/GCA_026129495.1_ASM2612949v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-11-10", "dateModified": "2022-11-10", "datePublished": "2022-11-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Cyclobacteriaceae bacterium" ], "sample_taxid": [ "2099675" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Hong Kong" ], "sample_host_location_id": [], "data_size": "1.020 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3601810", "Number of Sequences": "33", "Longest Sequences 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soli", "ani": 75.3966, "matched_fragments": 73, "total_fragments": 1185, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Chryseolinea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.371, "cell_length": 0.212, "doubling_h": 0.69, "growth_tmp": 29.892, "optimum_tmp": 29.982, "optimum_ph": 7.789, "genome_size": 5000064.315, "gc_content": 42.262, "coding_genes": 4476.416, "rRNA16S_genes": 3.75, "tRNA_genes": 40.25, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.054, "range_salinity": 1.0, "facultative_respiration": 0.022, "anaerobic_respiration": 0.0, "aerobic_respiration": 0.977, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.9, "coccus_cell_shape": 0.05, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.025, "spiral_cell_shape": 0.025 }, "_gtdb_taxon": [ "d__Bacteria", "p__Bacteroidota", "c__Bacteroidia", "o__Cytophagales", "f__Cyclobacteriaceae", "g__ELB16-189", "s__ELB16-189 sp020635915" ], "_genome_taxon": [ "Cyclobacteriaceae", "bacterium", "d__Bacteria", "p__Bacteroidota", "c__Bacteroidia", "o__Cytophagales", "f__Cyclobacteriaceae", "g__ELB16-189", "s__ELB16-189 sp020635915", "Bacteria", "Bacteroidota", "Bacteroidia", "Cytophagales", "Cyclobacteriaceae", "ELB16-189", "ELB16-189", "sp020635915" ], "_meo": [ { "id": "MEO_0000014", "label": "activated sludge" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }