{
    "type": "genome",
    "identifier": "GCA_026338105.1",
    "organism": "Acetatifactor sp.",
    "title": "Acetatifactor sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "San Diego State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026338105.1",
        "bioproject": "PRJNA876044",
        "biosample": "SAMN31110529",
        "wgs_master": "JAPKXF000000000.1",
        "refseq_category": "na",
        "taxid": "1872090",
        "species_taxid": "1872090",
        "organism_name": "Acetatifactor sp.",
        "infraspecific_name": "",
        "isolate": "Bin.045",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/23",
        "asm_name": "ASM2633810v1",
        "submitter": "San Diego State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/338/105/GCA_026338105.1_ASM2633810v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-23",
    "dateModified": "2022-11-23",
    "datePublished": "2022-11-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acetatifactor sp."
        ],
        "sample_taxid": [
            "1872090"
        ],
        "sample_host_organism": [
            "Mus musculus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: La Jolla"
        ],
        "sample_host_location_id": [],
        "data_size": "1.130 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3972461",
        "Number of Sequences": "126",
        "Longest Sequences (bp)": "422515",
        "N50 (bp)": "94090",
        "Gap Ratio (%)": "0.044632",
        "GCcontent (%)": "51.8",
        "Number of CDSs": "3567",
        "Average Protein Length": "327.3",
        "Coding Ratio (%)": "88.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Acetatifactor muris",
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                "accession": "GCA_024623325.1",
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                "species_taxid": 879566,
                "relation_to_type": "type",
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                "matched_fragments": 182,
                "total_fragments": 1255,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster asparagiformis",
                "strain": "strain=DSM 15981",
                "accession": "GCA_000158075.1",
                "taxid": 333367,
                "species_taxid": 333367,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 71,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterocloster asparagiformis",
                "strain": "strain=DSM 15981",
                "accession": "GCA_025149125.1",
                "taxid": 333367,
                "species_taxid": 333367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5907,
                "matched_fragments": 73,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eisenbergiella massiliensis",
                "strain": "strain=AT11",
                "accession": "GCA_900243045.1",
                "taxid": 1720294,
                "species_taxid": 1720294,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4662,
                "matched_fragments": 97,
                "total_fragments": 1255,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Eisenbergiella porci",
                "strain": "strain=WCA-389-WT-23B",
                "accession": "GCA_009696275.1",
                "taxid": 2652274,
                "species_taxid": 2652274,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3466,
                "matched_fragments": 88,
                "total_fragments": 1255,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_011959105.1",
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                "ani": 99.397,
                "matched_fragments": 1080,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.00",
                "min_intra_species_ani": "99.00",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_910585015.1",
                "gtdb_species": "s__Acetatifactor sp910585015",
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                "matched_fragments": 727,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910583845.1",
                "gtdb_species": "s__Acetatifactor sp910583845",
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                "matched_fragments": 699,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910584375.1",
                "gtdb_species": "s__Acetatifactor sp910584375",
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                "matched_fragments": 666,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910577235.1",
                "gtdb_species": "s__Acetatifactor sp910577235",
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                "matched_fragments": 606,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014804645.1",
                "gtdb_species": "s__Acetatifactor sp014804645",
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                "matched_fragments": 602,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017624175.1",
                "gtdb_species": "s__Acetatifactor sp017624175",
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                "matched_fragments": 370,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910586215.1",
                "gtdb_species": "s__Acetatifactor sp910586215",
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                "matched_fragments": 202,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Acetatifactor",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003343625.1",
                "gtdb_species": "s__Eisenbergiella pullicola",
                "ani": 76.1202,
                "matched_fragments": 50,
                "total_fragments": 1255,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Eisenbergiella",
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                "mean_intra_species_ani": "99.34",
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                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 4,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Acetatifactor",
        "s__Acetatifactor sp011959105"
    ],
    "_genome_taxon": [
        "Acetatifactor",
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        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Lachnospirales",
        "f__Lachnospiraceae",
        "g__Acetatifactor",
        "s__Acetatifactor sp011959105",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Lachnospirales",
        "Lachnospiraceae",
        "Acetatifactor",
        "Acetatifactor",
        "sp011959105"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}