{
    "type": "genome",
    "identifier": "GCA_026387035.1",
    "organism": "Planctomycetota bacterium",
    "title": "Planctomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_026387035.1",
        "bioproject": "PRJNA852163",
        "biosample": "SAMN30026295",
        "wgs_master": "JAPLMM000000000.1",
        "refseq_category": "na",
        "taxid": "2026780",
        "species_taxid": "2026780",
        "organism_name": "Planctomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "LacPavin_0920_SED5_MAG_66_35",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2022/11/24",
        "asm_name": "ASM2638703v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/026/387/035/GCA_026387035.1_ASM2638703v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2022-11-24",
    "dateModified": "2022-11-24",
    "datePublished": "2022-11-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Planctomycetota bacterium"
        ],
        "sample_taxid": [
            "2026780"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "France: Besse-et-Saint-Anastaise, Lac Pavin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.710 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 1.85,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2545619",
        "Number of Sequences": "317",
        "Longest Sequences (bp)": "56325",
        "N50 (bp)": "10910",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.4",
        "Number of CDSs": "1956",
        "Average Protein Length": "324.3",
        "Coding Ratio (%)": "74.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "37",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Tautonia plasticadhaerens",
                "strain": "strain=ElP",
                "accession": "GCA_007752535.1",
                "taxid": 2527974,
                "species_taxid": 2527974,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.042,
                "matched_fragments": 67,
                "total_fragments": 681,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paludisphaera soli",
                "strain": "strain=JC670",
                "accession": "GCA_011064595.1",
                "taxid": 2712865,
                "species_taxid": 2712865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9581,
                "matched_fragments": 69,
                "total_fragments": 681,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8066,
                "matched_fragments": 62,
                "total_fragments": 681,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinacidiphila acididurans",
                "strain": "strain=KK5PA1",
                "accession": "GCA_016918855.1",
                "taxid": 2784346,
                "species_taxid": 2784346,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6605,
                "matched_fragments": 56,
                "total_fragments": 681,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 1.85,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016782785.1",
                "gtdb_species": "s__BS750m-G62 sp016782785",
                "ani": 77.6815,
                "matched_fragments": 190,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346;f__FEN-1346;g__BS750m-G62",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016872895.1",
                "gtdb_species": "s__VGYT01 sp016872895",
                "ani": 77.3718,
                "matched_fragments": 218,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346;f__FEN-1346;g__VGYT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003170085.1",
                "gtdb_species": "s__FEN-1346 sp003170085",
                "ani": 76.8469,
                "matched_fragments": 191,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346;f__FEN-1346;g__FEN-1346",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012729015.1",
                "gtdb_species": "s__JAAYDY01 sp012729015",
                "ani": 75.9135,
                "matched_fragments": 71,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346;f__JAACEH01;g__JAAYDY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002071695.1",
                "gtdb_species": "s__MWDR01 sp002071695",
                "ani": 75.6953,
                "matched_fragments": 69,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__SM23-33;f__SM23-33;g__MWDR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016935955.1",
                "gtdb_species": "s__JAAYDY01 sp016935955",
                "ani": 75.6786,
                "matched_fragments": 54,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__FEN-1346;f__JAACEH01;g__JAAYDY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011327615.1",
                "gtdb_species": "s__DSUN01 sp011327615",
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                "matched_fragments": 63,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__PUPC01;o__DSUN01;f__DSUN01;g__DSUN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012514895.1",
                "gtdb_species": "s__JAAYZK01 sp012514895",
                "ani": 75.3133,
                "matched_fragments": 61,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__SM23-33;f__FEN-1343;g__JAAYZK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016918855.1",
                "gtdb_species": "s__Streptomyces acididurans",
                "ani": 74.6605,
                "matched_fragments": 56,
                "total_fragments": 681,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__FEN-1346",
        "f__FEN-1346",
        "g__JAPLMM01",
        "s__JAPLMM01 sp026387035"
    ],
    "_genome_taxon": [
        "Planctomycetota",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__FEN-1346",
        "f__FEN-1346",
        "g__JAPLMM01",
        "s__JAPLMM01 sp026387035",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "FEN-1346",
        "FEN-1346",
        "JAPLMM01",
        "JAPLMM01",
        "sp026387035"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}